RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 INTS10Q9NVR2 710 aaKnown RBP24■■□□□ 1.43
HMGA2-208ENST00000537429 NDUFS3O75489 264 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 THEGLP0DJG4 465 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 GNSP15586 552 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 LEPRP48357 1165 aaKnown RBP23.99■■□□□ 1.43
HMGA2-208ENST00000537429 MPP1Q00013 466 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 B4GALNT1Q00973 533 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 TMEM115Q12893 351 aaPredicted RBP23.99■■□□□ 1.43
HMGA2-208ENST00000537429 NFATC4Q14934 902 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 EFTUD2Q15029 972 aaKnown RBP eCLIP23.99■■□□□ 1.436e-8■□□□□ 10.7
HMGA2-208ENST00000537429 ZNF648Q5T619 568 aaPredicted RBP23.99■■□□□ 1.43
HMGA2-208ENST00000537429 RNF187Q5TA31 235 aaPredicted RBP23.99■■□□□ 1.43
HMGA2-208ENST00000537429 PEAR1Q5VY43 1037 aaPredicted RBP23.99■■□□□ 1.43
HMGA2-208ENST00000537429 MARK2Q7KZI7 788 aaKnown RBP23.99■■□□□ 1.43
HMGA2-208ENST00000537429 GALNT7Q86SF2 657 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 CTAGE3PQ8IX95 158 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 HEXDCQ8WVB3 486 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 KLHDC7BQ96G42 594 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 BOCQ9BWV1 1114 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 ARGLU1Q9NWB6 273 aaPredicted RBP23.99■■□□□ 1.43
HMGA2-208ENST00000537429 NSMCE4AQ9NXX6 385 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 VPS18Q9P253 973 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 PSAT1Q9Y617 370 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 DMDP11532 3685 aa23.99■■□□□ 1.43
HMGA2-208ENST00000537429 PFDN6O15212 129 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 AHSGP02765 367 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 F7P08709 466 aaPredicted RBP23.98■■□□□ 1.43
HMGA2-208ENST00000537429 GABRB3P28472 473 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 NAB1Q13506 487 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 KLHL38Q2WGJ6 581 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 ZNF789Q5FWF6 425 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 TPRG1LQ5T0D9 272 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 PACS1Q6VY07 963 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 ADGRG6Q86SQ4 1221 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 LRRC6Q86X45 466 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 SYT12Q8IV01 421 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 RBFAQ8N0V3 343 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 SLC22A18ASQ8N1D0 253 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 PPM1NQ8N819 430 aa23.98■■□□□ 1.43
HMGA2-208ENST00000537429 FBXO6Q9NRD1 293 aaPredicted RBP23.98■■□□□ 1.43
HMGA2-208ENST00000537429 MYO15AQ9UKN7 3530 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 CACNA1HO95180 2353 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 A0A1B0GTW7 788 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 TMEM202A6NGA9 273 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 VEGFDO43915 354 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 OR1I1O60431 355 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 HAUS5O94927 633 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 ZNF7P17097 686 aaPredicted RBP23.97■■□□□ 1.43
HMGA2-208ENST00000537429 AKT1P31749 480 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 NSG1P42857 185 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 AFF3P51826 1226 aaKnown RBP23.97■■□□□ 1.43
HMGA2-208ENST00000537429 THOP1P52888 689 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 PDE1CQ14123 709 aaPredicted RBP23.97■■□□□ 1.43
HMGA2-208ENST00000537429 FBXO38Q6PIJ6 1188 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 DCP2Q8IU60 420 aaKnown RBP23.97■■□□□ 1.43
HMGA2-208ENST00000537429 LPGAT1Q92604 370 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 ATXN10Q9UBB4 475 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 SUSD2Q9UGT4 822 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 VPS9D1Q9Y2B5 631 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 TMEM98Q9Y2Y6 226 aa23.97■■□□□ 1.43
HMGA2-208ENST00000537429 PRR5-ARHGAP8B1AHC4 643 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 VILLO15195 856 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 ASMTLO95671 621 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 SHBGP04278 402 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 NUDT17P0C025 328 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 MSH3P20585 1137 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 KELP23276 732 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 HTR1BP28222 390 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 ADARP55265 1226 aaKnown RBP23.96■■□□□ 1.43
HMGA2-208ENST00000537429 LAYNQ6UX15 382 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 STRA8Q7Z7C7 330 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 DCUN1D1Q96GG9 259 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 LOXL4Q96JB6 756 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 CPNE1Q99829 537 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 MCMBPQ9BTE3 642 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 ZCCHC2Q9C0B9 1178 aaKnown RBP23.96■■□□□ 1.43
HMGA2-208ENST00000537429 P2RY12Q9H244 342 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 KCNH6Q9H252 994 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 SMG5Q9UPR3 1016 aaKnown RBP23.96■■□□□ 1.43
HMGA2-208ENST00000537429 SLC17A4Q9Y2C5 497 aa23.96■■□□□ 1.43
HMGA2-208ENST00000537429 SPTY2D1-AS1A0A0U1RR47 76 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 CFAP99D6REC4 459 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 TLR4O00206 839 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 PRMT5O14744 637 aaPredicted RBP23.95■■□□□ 1.43
HMGA2-208ENST00000537429 MAGEC1O60732 1142 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 CDK14O94921 469 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 CEACAM5P06731 702 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 RALBP11234 206 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 ATP1B2P14415 290 aaPredicted RBP23.95■■□□□ 1.43
HMGA2-208ENST00000537429 HOXD12P35452 270 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 DPP6P42658 865 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 CSNK1EP49674 416 aaKnown RBP23.95■■□□□ 1.43
HMGA2-208ENST00000537429 PTK2BQ14289 1009 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 CNSTQ6PJW8 725 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 MACC1Q6ZN28 852 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 RASGEF1AQ8N9B8 481 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 SKA1Q96BD8 255 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 WDR92Q96MX6 357 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 OR2AG1Q9H205 316 aa23.95■■□□□ 1.43
HMGA2-208ENST00000537429 FAM86C1Q9NVL1 165 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms