RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 ABCG4Q9H172 646 aa10.73□□□□□ -0.69
LDHA-215ENST00000537296 TRABDQ9H4I3 376 aa10.73□□□□□ -0.69
LDHA-215ENST00000537296 SYNDIG1Q9H7V2 258 aa10.73□□□□□ -0.69
LDHA-215ENST00000537296 UGT1A7Q9HAW7 530 aa10.73□□□□□ -0.69
LDHA-215ENST00000537296 UGT1A10Q9HAW8 530 aa10.73□□□□□ -0.69
LDHA-215ENST00000537296 UGT1A8Q9HAW9 530 aa10.73□□□□□ -0.69
LDHA-215ENST00000537296 NCKIPSDQ9NZQ3 722 aa10.73□□□□□ -0.69
LDHA-215ENST00000537296 VPS18Q9P253 973 aa10.73□□□□□ -0.69
LDHA-215ENST00000537296 ZMIZ1Q9ULJ6 1067 aa10.73□□□□□ -0.69
LDHA-215ENST00000537296 KCNK6Q9Y257 313 aa10.73□□□□□ -0.69
LDHA-215ENST00000537296 AAR2Q9Y312 384 aaKnown RBP10.73□□□□□ -0.69
LDHA-215ENST00000537296 APC2O95996 2303 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 UQCRHLA0A096LP55 91 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 A0A1W2PQM1 296 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 PMS2P1A4D2B8 440 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 USP27XA6NNY8 438 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 NUAK1O60285 661 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 CEP104O60308 925 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 CSO75390 466 aaKnown RBP10.72□□□□□ -0.69
LDHA-215ENST00000537296 FGGP02679 453 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 UQCRHP07919 91 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 CDK4P11802 303 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 ACP5P13686 325 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 SPAM1P38567 509 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 TNNT3P45378 269 aaPredicted RBP10.72□□□□□ -0.69
LDHA-215ENST00000537296 CCL7P80098 99 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 CERCAMQ5T4B2 595 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 CRTC3Q6UUV7 619 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 C17orf82Q86X59 251 aaPredicted RBP10.72□□□□□ -0.69
LDHA-215ENST00000537296 ZNF547Q8IVP9 402 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 Q8N9G6 341 aaPredicted RBP10.72□□□□□ -0.69
LDHA-215ENST00000537296 KDF1Q8NAX2 398 aaPredicted RBP10.72□□□□□ -0.69
LDHA-215ENST00000537296 NAT6Q93015 286 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 CCDC97Q96F63 343 aaPredicted RBP10.72□□□□□ -0.69
LDHA-215ENST00000537296 TRIM39Q9HCM9 518 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 TRMT1Q9NXH9 659 aaKnown RBP10.72□□□□□ -0.69
LDHA-215ENST00000537296 SMARCAL1Q9NZC9 954 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 HACD3Q9P035 362 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 LRIT1Q9P2V4 623 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 TBC1D29Q9UFV1 150 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 SLC23A2Q9UGH3 650 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 FKBPLQ9UIM3 349 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 ZNF148Q9UQR1 794 aa10.72□□□□□ -0.69
LDHA-215ENST00000537296 GLYATL1P3A0A0U1RQE8 302 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 GRID2O43424 1007 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 NRDCO43847 1150 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 IFNB1P01574 187 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 RPLP0P05388 317 aaKnown RBP10.71□□□□□ -0.69
LDHA-215ENST00000537296 GRIA1P42261 906 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 KCNJ1P48048 391 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 TMPRSS15P98073 1019 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 TAF1AQ15573 450 aaPredicted RBP10.71□□□□□ -0.69
LDHA-215ENST00000537296 TMPRSS9Q7Z410 1059 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 B3GNT8Q7Z7M8 397 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 PHYKPLQ8IUZ5 450 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 ARL14Q8N4G2 192 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 OR4K2Q8NGD2 314 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 MS4A14Q96JA4 679 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 SRPK1Q96SB4 655 aaKnown RBP10.71□□□□□ -0.69
LDHA-215ENST00000537296 TMUB1Q9BVT8 246 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 REPIN1Q9BWE0 567 aaKnown RBP10.71□□□□□ -0.69
LDHA-215ENST00000537296 ETNK1Q9HBU6 452 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 ARNT2Q9HBZ2 717 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 EVA1BQ9NVM1 165 aa10.71□□□□□ -0.69
LDHA-215ENST00000537296 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.71□□□□□ -0.693e-13■■■□□ 17.7
LDHA-215ENST00000537296 ATXN7L1Q9ULK2 861 aaPredicted RBP10.71□□□□□ -0.69
LDHA-215ENST00000537296 ACACAQ13085 2346 aa10.71□□□□□ -0.7
LDHA-215ENST00000537296 DSPP15924 2871 aaKnown RBP10.7□□□□□ -0.7
LDHA-215ENST00000537296 ANKRD11Q6UB99 2663 aaPredicted RBP10.7□□□□□ -0.7
LDHA-215ENST00000537296 CCDC78A2IDD5 438 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 AGRPO00253 132 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 NTN3O00634 580 aaPredicted RBP10.7□□□□□ -0.7
LDHA-215ENST00000537296 CHUKO15111 745 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 PPM1DO15297 605 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 STX7O15400 261 aaKnown RBP10.7□□□□□ -0.7
LDHA-215ENST00000537296 LDB2O43679 373 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 AP2A1O95782 977 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 MPOP05164 745 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 PRSS56P0CW18 603 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 GLB1P16278 677 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 LPOP22079 712 aaPredicted RBP10.7□□□□□ -0.7
LDHA-215ENST00000537296 ZNF140P52738 457 aaPredicted RBP10.7□□□□□ -0.7
LDHA-215ENST00000537296 XIAPP98170 497 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 ISXQ2M1V0 245 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 P3H1Q32P28 736 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 PDPK2PQ6A1A2 396 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 SPRED1Q7Z699 444 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 ZNF761Q86XN6 746 aaPredicted RBP10.7□□□□□ -0.7
LDHA-215ENST00000537296 SLC35F6Q8N357 371 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 OR52K1Q8NGK4 314 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 BRSK1Q8TDC3 778 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 ATXN7L3BQ96GX2 97 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 VPS35Q96QK1 796 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 FOXP3Q9BZS1 431 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 CCDC86Q9H6F5 360 aaKnown RBP10.7□□□□□ -0.7
LDHA-215ENST00000537296 RAD18Q9NS91 495 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 PKP3Q9Y446 797 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 ENTPD2Q9Y5L3 495 aa10.7□□□□□ -0.7
LDHA-215ENST00000537296 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.7□□□□□ -0.76e-22■■□□□ 11.6
LDHA-215ENST00000537296 CACNA1BQ00975 2339 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms