RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RPS17P08708 135 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ACO1P21399 889 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 MAPK1P28482 360 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 LIPEQ05469 1076 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TARDBPQ13148 414 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ACAP2Q15057 778 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 NOMO1Q15155 1222 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ATP6AP1Q15904 470 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 PFKFB4Q16877 469 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 RETREG3Q86VR2 466 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 BTN2A2Q8WVV5 523 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 IPCEF1Q8WWN9 437 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SPATA13Q96N96 652 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 LGMNQ99538 433 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TP63Q9H3D4 680 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 SYTL2Q9HCH5 934 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 MAP10Q9P2G4 905 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 HEMK1Q9Y5R4 338 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 TRPM3Q9HCF6 1732 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 PLA2G6O60733 806 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 GLP2RO95838 553 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 HNF4AP41235 474 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 RECQLP46063 649 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 P2RX3P56373 397 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CDKL1Q00532 357 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CD83Q01151 205 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 CCSAPQ6IQ19 270 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 BHLHB9Q6PI77 547 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 GLIS1Q8NBF1 620 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 B3GALNT2Q8NCR0 500 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 ASIC4Q96FT7 647 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 KAT8Q9H7Z6 458 aaKnown RBP5.37□□□□□ -1.55
PTPRD-213ENST00000537002 POPDC2Q9HBU9 364 aa5.37□□□□□ -1.55
PTPRD-213ENST00000537002 PAPPAQ13219 1627 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 UPK1BO75841 260 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 PGLSO95336 258 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ANGPTL1O95841 491 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 GUCA1CO95843 209 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 SERPINA1P01009 418 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CHRNGP07510 517 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 FMO3P31513 532 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 PRKCDQ05655 676 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CEACAM7Q14002 265 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CBX2Q14781 532 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 HIST2H2ACQ16777 129 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ANKS6Q68DC2 871 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 GLYATQ6IB77 296 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 MZT2AQ6P582 158 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 RNF111Q6ZNA4 994 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 OR56A4Q8NGH8 313 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 WDR36Q8NI36 951 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 SLC39A13Q96H72 371 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ZBTB45Q96K62 511 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TTYH2Q9BSA4 534 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CNPPD1Q9BV87 410 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 SEZ6LQ9BYH1 1024 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 IL22Q9GZX6 179 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM168Q9H0V1 697 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 EXD2Q9NVH0 621 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM216Q9P0N5 145 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TCRBV7S3A2A0A539 114 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 OR6C70A6NIJ9 312 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 C12orf71A8MTZ7 269 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 I3L521 148 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 PLK4O00444 970 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CDH1P12830 882 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 IL7RP16871 459 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 RAB10P61026 200 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 MRPS5P82675 430 aaKnown RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 NRG1Q02297 640 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 SCRN3Q0VDG4 424 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 SCUBE3Q8IX30 993 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 METTL6Q8TCB7 284 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 POF1BQ8WVV4 589 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 RNF157Q96PX1 679 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 OR52B2Q96RD2 323 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 MIR1-1HGQ9H1L0 117 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ABCG8Q9H221 673 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CATSPERBQ9H7T0 1116 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 AASDHPPTQ9NRN7 309 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 STUB1Q9UNE7 303 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CNTNAP1P78357 1384 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 GLI3P10071 1580 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ASB14A6NK59 587 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 IFRD1O00458 451 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF197O14709 1029 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 TSPAN3O60637 253 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ATE1O95260 518 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 C9P02748 559 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 NPR3P17342 541 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CDH5P33151 784 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 IDUAP35475 653 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ETV1P50549 477 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF135P52742 658 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 CDH8P55286 799 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 ARL13AQ5H913 290 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-213ENST00000537002 XRRA1Q6P2D8 792 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 PLET1Q6UQ28 207 aa5.36□□□□□ -1.55
PTPRD-213ENST00000537002 MTFMTQ96DP5 389 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms