RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 DNAJC6O75061 913 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 UBXN7O94888 489 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 LIFP15018 202 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 TCN2P20062 427 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 CSF2RBP32927 897 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 PBX1P40424 430 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 ARSEP51690 589 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 DCDC1P59894 354 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 DYNLT1P63172 113 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 CYP4F2P78329 520 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 MC2RQ01718 297 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 NIPAL4Q0D2K0 466 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 PTPRRQ15256 657 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 SEPT7Q16181 437 aaKnown RBP13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 PPP2R5EQ16537 467 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 RFLNAQ6ZTI6 216 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 CNGA4Q8IV77 575 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 CCDC50Q8IVM0 306 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 SLC35G2Q8TBE7 412 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 PTCD2Q8WV60 388 aaKnown RBP13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 TFB1MQ8WVM0 346 aaKnown RBP13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 GLYATL1Q969I3 302 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 CTRCQ99895 268 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 FSD1LQ9BXM9 530 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 ULBP3Q9BZM4 244 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 TRABDQ9H4I3 376 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 STARD5Q9NSY2 213 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 OCIAD1Q9NX40 245 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 HACD3Q9P035 362 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 KLHL8Q9P2G9 620 aaPredicted RBP13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 ATXN10Q9UBB4 475 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 TUBD1Q9UJT1 453 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 DNAJC16Q9Y2G8 782 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 PKP3Q9Y446 797 aa13.08□□□□□ -0.32
CLSTN3-205ENST00000535452 A0A0U1RQS6 177 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 FADS2P1A8MWK0 482 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 PMPCBO75439 489 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 STK17BO94768 372 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 IPO7O95373 1038 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 NDST3O95803 873 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 MT-ND3P03897 115 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 PTMAP06454 111 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 ZNF8P17098 575 aaPredicted RBP13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 CTNNA2P26232 953 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 HNRNPH3P31942 346 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 CETN2P41208 172 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 CLCNKAP51800 687 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 POLE2P56282 527 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 TAS2R40P59535 323 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 ABHD18Q0P651 414 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 SRSF6Q13247 344 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 KCNAB2Q13303 367 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 ITGA9Q13797 1035 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 PLCL1Q15111 1095 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 SLC14A2Q15849 920 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 PLA2G4EQ3MJ16 856 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 LINC00303Q3SY05 128 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 LRRC38Q5VT99 294 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 ARMC6Q6NXE6 501 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 PQLC3Q8N755 202 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 EXD3Q8N9H8 876 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 RAPGEF5Q92565 580 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 P3H4Q92791 437 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 RNF25Q96BH1 459 aaPredicted RBP13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 RTP4Q96DX8 246 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 IMP4Q96G21 291 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 TGM7Q96PF1 710 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 VAT1Q99536 393 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 TIMM29Q9BSF4 260 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 FUCA2Q9BTY2 467 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 UCK1Q9HA47 277 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 PDE7BQ9NP56 450 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 PRDM8Q9NQV8 689 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 IL17BQ9UHF5 180 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 FAM153AQ9UHL3 310 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 OAS3Q9Y6K5 1087 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 KIF26BQ2KJY2 2108 aa13.07□□□□□ -0.32
CLSTN3-205ENST00000535452 COL27A1Q8IZC6 1860 aaPredicted RBP13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 STK10O94804 968 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 PRLP01236 227 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 PRKAR1AP10644 381 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 ZNF7P17097 686 aaPredicted RBP13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 XRCC1P18887 633 aaPredicted RBP13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 PDE1BQ01064 536 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 ZBTB17Q13105 803 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 IL11RAQ14626 422 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 TEX44Q53QW1 395 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 SLC9A4Q6AI14 798 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 IRGCQ6NXR0 463 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 C16orf46Q6P387 395 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 TMEM26Q6ZUK4 368 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 BEND7Q8N7W2 519 aaPredicted RBP13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 C9orf43Q8TAL5 461 aaPredicted RBP13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 APOBEC4Q8WW27 367 aaKnown RBP13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 SEC14L1Q92503 715 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 SLC45A3Q96JT2 553 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 PLEKHG4BQ96PX9 1271 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 CEP41Q9BYV8 373 aa13.06□□□□□ -0.32
CLSTN3-205ENST00000535452 ABHD10Q9NUJ1 306 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms