RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 PPHLN1Q8NEY8 458 aaKnown RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 ABHD11Q8NFV4 315 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 NDRG1Q92597 394 aaKnown RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 LRRC58Q96CX6 371 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 ZNF641Q96N77 438 aaPredicted RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 ALPK1Q96QP1 1244 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 PSD2Q9BQI7 771 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 WDR12Q9GZL7 423 aaKnown RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 LHPPQ9H008 270 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 ING2Q9H160 280 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 SOX17Q9H6I2 414 aaPredicted RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 PIGVQ9NUD9 493 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 MARCH5Q9NX47 278 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 SPATA7Q9P0W8 599 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 ZNF639Q9UID6 485 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 BRWD1Q9NSI6 2320 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 NT5C1B-RDH14C9J2C7 533 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 SOX1O00570 391 aaPredicted RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 HCRTO43612 131 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 SYNCRIPO60506 623 aaKnown RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 KCNH1O95259 989 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 LTA4HP09960 611 aaKnown RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 PAMP19021 973 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 CAPN3P20807 821 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 ARNTP27540 789 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 ELK4P28324 431 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 IDUAP35475 653 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 HCAR3P49019 387 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 SLC11A1P49279 550 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 MLLT10P55197 1068 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 CD300CQ08708 224 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 AASDHQ4L235 1098 aaPredicted RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 ZNF470Q6ECI4 717 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 GTF2IRD2BQ6EKJ0 949 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 XAF1Q6GPH4 301 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 ESRP1Q6NXG1 681 aaKnown RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 CYHR1Q6ZMK1 362 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 GTF2IRD2Q86UP8 949 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 LRRC52Q8N7C0 313 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 SLC2A14Q8TDB8 520 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 USP33Q8TEY7 942 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 HASPINQ8TF76 798 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 STARD8Q92502 1023 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 CLP1Q92989 425 aaKnown RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 NTAN1Q96AB6 310 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 PHF21BQ96EK2 531 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 SH3YL1Q96HL8 342 aaPredicted RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 TBL1YQ9BQ87 522 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 C17orf80Q9BSJ5 609 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 BDH2Q9BUT1 245 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 MRPL9Q9BYD2 267 aaKnown RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 NKX2-4Q9H2Z4 354 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 GSTO2Q9H4Y5 243 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 AKTIPQ9H8T0 292 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 FBXO5Q9UKT4 447 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 UBQLN1Q9UMX0 589 aaKnown RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 AAR2Q9Y312 384 aaKnown RBP8.85□□□□□ -0.99
SORL1-213ENST00000534754 DERAQ9Y315 318 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 VWA7Q9Y334 891 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 DOCK6Q96HP0 2047 aa8.85□□□□□ -0.99
SORL1-213ENST00000534754 TCRBV5S2A0A599 114 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 C16orf96A6NNT2 1141 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 UBFD1O14562 309 aaKnown RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 OXSR1O95747 527 aaPredicted RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 EIF2S1P05198 315 aaKnown RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 GALTP07902 379 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 MTHFD1P11586 935 aaKnown RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 IMPDH1P20839 514 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 GSTM2P28161 218 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 SCAPQ12770 1279 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 SEMA3BQ13214 749 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 CBX2Q14781 532 aaPredicted RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 ACAP2Q15057 778 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 UPP1Q16831 310 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 COQ5Q5HYK3 327 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 RBM48Q5RL73 367 aaKnown RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 ZNF362Q5T0B9 420 aaPredicted RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 DEPDC1Q5TB30 811 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 SYPL2Q5VXT5 272 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 ZNF280DQ6N043 979 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 KIAA0408Q6ZU52 694 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 OTOP3Q7RTS5 596 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 FAM35AQ86V20 835 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 PIGZQ86VD9 579 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 PTRH1Q86Y79 214 aaKnown RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 PTCD2Q8WV60 388 aaKnown RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 EFHD2Q96C19 240 aaPredicted RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 TSPAN17Q96FV3 270 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 C3orf30Q96M34 536 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 MUS81Q96NY9 551 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 CSF3RQ99062 836 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 KCTD14Q9BQ13 255 aaPredicted RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 VN1R3Q9BXE9 311 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 TRIM54Q9BYV2 358 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 PRG3Q9Y2Y8 225 aaPredicted RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 PCDHA9Q9Y5H5 950 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 PIRO00625 290 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 SPTLC1O15269 473 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms