RNA–Protein interactions for RNA: ENST00000534093.5

ROM1-205, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ROM1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-205ENST00000534093 XIAPP98170 497 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 CDH17Q12864 832 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 TMEM115Q12893 351 aaPredicted RBP12.52□□□□□ -0.41
ROM1-205ENST00000534093 TARDBPQ13148 414 aaKnown RBP eCLIP12.52□□□□□ -0.41
ROM1-205ENST00000534093 GTF2H3Q13889 308 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 SEPT6Q14141 434 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 LDLRAP1Q5SW96 308 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 CERCAMQ5T4B2 595 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 CDCP2Q5VXM1 449 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 CRTC3Q6UUV7 619 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 UNQ6494/PRO21346Q6UXR6 183 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 PPP1R21Q6ZMI0 780 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 C17orf82Q86X59 251 aaPredicted RBP12.52□□□□□ -0.41
ROM1-205ENST00000534093 NAGSQ8N159 534 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 CACTIN-AS1Q8N1I8 211 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 DNAAF3Q8N9W5 541 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 DDHD1Q8NEL9 900 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 ACTRT1Q8TDG2 376 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 MAGOHBQ96A72 148 aaKnown RBP12.52□□□□□ -0.41
ROM1-205ENST00000534093 DNAJC1Q96KC8 554 aaKnown RBP12.52□□□□□ -0.41
ROM1-205ENST00000534093 SMOXQ9NWM0 555 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 RABGEF1Q9UJ41 708 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 CLCA2Q9UQC9 943 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 KCNK6Q9Y257 313 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 RNF215Q9Y6U7 377 aa12.52□□□□□ -0.41
ROM1-205ENST00000534093 CCL22O00626 93 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 KMOO15229 486 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 GAS8O95995 478 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 APRTP07741 180 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 GLB1P16278 677 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 COILP38432 576 aaPredicted RBP12.51□□□□□ -0.41
ROM1-205ENST00000534093 HADHAP40939 763 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 GRIA1P42261 906 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 BASP1P80723 227 aaKnown RBP12.51□□□□□ -0.41
ROM1-205ENST00000534093 CAMK2BQ13554 666 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 CYP1B1Q16678 543 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 KCTD19Q17RG1 926 aaPredicted RBP12.51□□□□□ -0.41
ROM1-205ENST00000534093 PLA2G4EQ3MJ16 856 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 GPRC6AQ5T6X5 926 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 TTC27Q6P3X3 843 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 LRRTM4Q86VH4 590 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 ZNF547Q8IVP9 402 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 ARL14Q8N4G2 192 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 DCBLD1Q8N8Z6 715 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 STYXQ8WUJ0 223 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 PATE1Q8WXA2 126 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 TTC25Q96NG3 672 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 ASB8Q9H765 288 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 CASS4Q9NQ75 786 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 EIF2B3Q9NR50 452 aaKnown RBP12.51□□□□□ -0.41
ROM1-205ENST00000534093 NLE1Q9NVX2 485 aaPredicted RBP12.51□□□□□ -0.41
ROM1-205ENST00000534093 LRIT1Q9P2V4 623 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 SLC23A2Q9UGH3 650 aa12.51□□□□□ -0.41
ROM1-205ENST00000534093 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.51□□□□□ -0.41
ROM1-205ENST00000534093 COL27A1Q8IZC6 1860 aaPredicted RBP12.51□□□□□ -0.41
ROM1-205ENST00000534093 AKAP13Q12802 2813 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 TRBV23OR9-2A0A075B6M9 112 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 MROH6A6NGR9 719 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 CASC3O15234 703 aaKnown RBP12.5□□□□□ -0.41
ROM1-205ENST00000534093 NUDT21O43809 227 aaKnown RBP12.5□□□□□ -0.41
ROM1-205ENST00000534093 EML2O95834 649 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 PNLIPP16233 465 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 ZNF7P17097 686 aaPredicted RBP12.5□□□□□ -0.41
ROM1-205ENST00000534093 TCP1P17987 556 aaKnown RBP12.5□□□□□ -0.41
ROM1-205ENST00000534093 ITGALP20701 1170 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 MC4RP32245 332 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 CLCNKAP51800 687 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 CCL7P80098 99 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 NFATC2Q13469 925 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 TRIP13Q15645 432 aaPredicted RBP12.5□□□□□ -0.41
ROM1-205ENST00000534093 INSCQ1MX18 579 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 CCDC38Q502W7 563 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 MICALCLQ6ZW33 695 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 SNX20Q7Z614 316 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 TRAPPC5Q8IUR0 188 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 RASGEF1AQ8N9B8 481 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 WDR48Q8TAF3 677 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 ULK4Q96C45 1275 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 DEPDC7Q96QD5 511 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 TIMM29Q9BSF4 260 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 ZCCHC2Q9C0B9 1178 aaKnown RBP12.5□□□□□ -0.41
ROM1-205ENST00000534093 FAM96AQ9H5X1 160 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 SYNDIG1Q9H7V2 258 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 KLC4Q9NSK0 619 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 TBC1D29Q9UFV1 150 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 CRLS1Q9UJA2 301 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 SLC30A1Q9Y6M5 507 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 BPTFQ12830 3046 aa12.5□□□□□ -0.41
ROM1-205ENST00000534093 ACACBO00763 2458 aa12.49□□□□□ -0.41
ROM1-205ENST00000534093 CCDC78A2IDD5 438 aa12.49□□□□□ -0.41
ROM1-205ENST00000534093 TRABD2BA6NFA1 517 aa12.49□□□□□ -0.41
ROM1-205ENST00000534093 RHPN2P1A8MT19 583 aa12.49□□□□□ -0.41
ROM1-205ENST00000534093 AGAP14A8MT82 685 aa12.49□□□□□ -0.41
ROM1-205ENST00000534093 H7C0S8 307 aa12.49□□□□□ -0.41
ROM1-205ENST00000534093 NTN3O00634 580 aaPredicted RBP12.49□□□□□ -0.41
ROM1-205ENST00000534093 SNX2O60749 519 aa12.49□□□□□ -0.41
ROM1-205ENST00000534093 PHF2O75151 1096 aa12.49□□□□□ -0.41
ROM1-205ENST00000534093 CSO75390 466 aaKnown RBP12.49□□□□□ -0.41
ROM1-205ENST00000534093 TCEA3O75764 348 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms