RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 SIK3Q9Y2K2 1263 aa9.12□□□□□ -0.95
PACS1-214ENST00000533811 TTLL3Q9Y4R7 772 aa9.12□□□□□ -0.95
PACS1-214ENST00000533811 PCDHGA9Q9Y5G4 932 aaKnown RBP9.12□□□□□ -0.95
PACS1-214ENST00000533811 MDC1Q14676 2089 aaKnown RBP9.12□□□□□ -0.95
PACS1-214ENST00000533811 CRYBG3Q68DQ2 2970 aa9.12□□□□□ -0.95
PACS1-214ENST00000533811 ABCA12Q86UK0 2595 aa9.12□□□□□ -0.95
PACS1-214ENST00000533811 PIKFYVEQ9Y2I7 2098 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 A0A0J9YYE9 177 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 FADS2P1A8MWK0 482 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 H3BRJ5 948 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 ZNF185O15231 689 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 RNF8O76064 485 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 MTA2O94776 668 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 LDLRP01130 860 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 TRBC1P01850 177 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 TPM2P07951 284 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 AMPD1P23109 780 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 ELAVL4P26378 380 aaKnown RBP9.11□□□□□ -0.95
PACS1-214ENST00000533811 PTPN4P29074 926 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 MIPP30301 263 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 ARL4AP40617 200 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 PDE1BQ01064 536 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 TUBB3Q13509 450 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 RAPSNQ13702 412 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 DPYSQ14117 519 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 KCNAB1Q14722 419 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 DPCR1Q3MIW9 517 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.11□□□□□ -0.95
PACS1-214ENST00000533811 TCP11X2Q5H9J9 407 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 PPP1R15BQ5SWA1 713 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 MARC1Q5VT66 337 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 C1QL3Q5VWW1 255 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 SLC6A19Q695T7 634 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 PWWP2BQ6NUJ5 590 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 CYB5D1Q6P9G0 228 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 TMCO3Q6UWJ1 677 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 PRSS42Q7Z5A4 293 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 SYVN1Q86TM6 617 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 MCOLN2Q8IZK6 566 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 LPCAT1Q8NF37 534 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 MR1Q95460 341 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 C19orf60Q96EN9 201 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 AGPAT1Q99943 283 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 OR2AG1Q9H205 316 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 CARD9Q9H257 536 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 ZWILCHQ9H900 591 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 RMI1Q9H9A7 625 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 TRIM10Q9UDY6 481 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 CNOT6Q9ULM6 557 aaKnown RBP9.11□□□□□ -0.95
PACS1-214ENST00000533811 CHKBQ9Y259 395 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 PPIL1Q9Y3C6 166 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 SPTBP11277 2137 aa9.11□□□□□ -0.95
PACS1-214ENST00000533811 C1orf232A0A0U1RR37 186 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ARHGAP10A1A4S6 786 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 TOX3O15405 576 aaPredicted RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 NUAK1O60285 661 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 MAFKO60675 156 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 RECKO95980 971 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 MBD3O95983 291 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 PEX11BO96011 259 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 SLC4A1P02730 911 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ZNF8P17098 575 aaPredicted RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 NELFEP18615 380 aaKnown RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 XRCC1P18887 633 aaPredicted RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 POU3F2P20265 443 aaPredicted RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 VARSP26640 1264 aaKnown RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 SLC19A1P41440 591 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 CAPZBP47756 277 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ARL4DP49703 201 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 PPP1CAP62136 330 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ELOAQ14241 798 aaKnown RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 NAA30Q147X3 362 aaPredicted RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 KYNUQ16719 465 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 SMTNL2Q2TAL5 461 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 RALGPS1Q5JS13 557 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 FKBP15Q5T1M5 1219 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ALS2CLQ60I27 953 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ACAD10Q6JQN1 1059 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 NLRP8Q86W28 1048 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 TICAM1Q8IUC6 712 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ARFGAP1Q8N6T3 406 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 Q8NA96 180 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 FDCSPQ8NFU4 85 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 NEK11Q8NG66 645 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 HSPH1Q92598 858 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ZNF653Q96CK0 615 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 CXorf40BQ96DE9 158 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ZDHHC12Q96GR4 267 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 MLPHQ9BV36 600 aaPredicted RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 GPR87Q9BY21 358 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 TRIM7Q9C029 511 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 UCK1Q9HA47 277 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 PKD2L2Q9NZM6 624 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ZNF624Q9P2J8 865 aaPredicted RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 ATXN10Q9UBB4 475 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 DNPEPQ9ULA0 475 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 FARSAQ9Y285 508 aaKnown RBP9.1□□□□□ -0.95
PACS1-214ENST00000533811 SLC5A6Q9Y289 635 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 CROCCQ5TZA2 2017 aa9.1□□□□□ -0.95
PACS1-214ENST00000533811 ANKRD17O75179 2603 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms