RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 NCSTNQ92542 709 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 ACDQ96AP0 544 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 SLC45A3Q96JT2 553 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 ZNF597Q96LX8 424 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 HGH1Q9BTY7 390 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 HERC2P3Q9BVR0 1158 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 SPATA16Q9BXB7 569 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 P2RY12Q9H244 342 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 PAPOLBQ9NRJ5 636 aaKnown RBP11.86□□□□□ -0.51
ATM-222ENST00000533733 CCM2LQ9NUG4 571 aaPredicted RBP11.86□□□□□ -0.51
ATM-222ENST00000533733 IL17CQ9P0M4 197 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 SUN2Q9UH99 717 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 FKBPLQ9UIM3 349 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 LEF1Q9UJU2 399 aaPredicted RBP11.86□□□□□ -0.51
ATM-222ENST00000533733 APPL1Q9UKG1 709 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 DHRS7Q9Y394 339 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 YIPF1Q9Y548 306 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 GPR45Q9Y5Y3 372 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 COMMD3-BMI1R4GMX3 469 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 ATP6AP2A0A1C7CYW4 349 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 NT5C1B-RDH14C9J2C7 533 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 H0Y626 953 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 NR5A2O00482 541 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 SOCS5O75159 536 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 EEDO75530 441 aaKnown RBP11.86□□□□□ -0.51
ATM-222ENST00000533733 ATP6AP2O75787 350 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 RNASEH2AO75792 299 aaKnown RBP11.86□□□□□ -0.51
ATM-222ENST00000533733 TSPAN12O95859 305 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 BMP2P12643 396 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 ZNF26P17031 533 aaPredicted RBP11.86□□□□□ -0.51
ATM-222ENST00000533733 PSMC3P17980 439 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 TCN1P20061 433 aaPredicted RBP11.86□□□□□ -0.51
ATM-222ENST00000533733 EEFSECP57772 596 aaKnown RBP11.86□□□□□ -0.51
ATM-222ENST00000533733 RHOAP61586 193 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 TRAF2Q12933 501 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 RCAN2Q14206 197 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 CTSL3PQ5NE16 218 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 C6orf10Q5SRN2 563 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 PSAPL1Q6NUJ1 521 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 FBXL19Q6PCT2 694 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 FAM217AQ8IXS0 508 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 ALDH16A1Q8IZ83 802 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 GRIN3AQ8TCU5 1115 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 ATP6V1E2Q96A05 226 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 LINGO1Q96FE5 620 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 C2orf49Q9BVC5 232 aaPredicted RBP11.86□□□□□ -0.51
ATM-222ENST00000533733 THEGQ9P2T0 379 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 DNMT3BQ9UBC3 853 aaKnown RBP11.86□□□□□ -0.51
ATM-222ENST00000533733 LHX3Q9UBR4 397 aa11.86□□□□□ -0.51
ATM-222ENST00000533733 NPEPPSL1A6NEC2 478 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 RAD51BO15315 384 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 MBL2P11226 248 aaPredicted RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 CHRM3P20309 590 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 PSMA4P25789 261 aaKnown RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 EPHB3P54753 998 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 TXNL4AP83876 142 aaKnown RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 CREMQ03060 361 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 DYNC1I2Q13409 638 aaKnown RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 RAB33AQ14088 237 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 RBBP7Q16576 425 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 INTS11Q5TA45 600 aaKnown RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 ERMP1Q7Z2K6 904 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 TMEM173Q86WV6 379 aaPredicted RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 PTRH1Q86Y79 214 aaKnown RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 RBFAQ8N0V3 343 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 OR9I1Q8NGQ6 314 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 BCL7CQ8WUZ0 217 aaPredicted RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 LRRC58Q96CX6 371 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 EXOC2Q96KP1 924 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 CLSTN3Q9BQT9 956 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 HAUS8Q9BT25 410 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 SLC2A11Q9BYW1 496 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 GPR63Q9BZJ6 419 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 TUBB1Q9H4B7 451 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 FBRSL1Q9HCM7 1045 aaKnown RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 SEMA4BQ9NPR2 832 aaPredicted RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 CD274Q9NZQ7 290 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 MAP10Q9P2G4 905 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 KLHL42Q9P2K6 505 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 GNPTGQ9UJJ9 305 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 LSM7Q9UK45 103 aaKnown RBP11.85□□□□□ -0.51
ATM-222ENST00000533733 PCDHGC4Q9Y5F7 938 aa11.85□□□□□ -0.51
ATM-222ENST00000533733 FAM234BA2RU67 622 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 CDC7O00311 574 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 GFRA2O00451 464 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 ADAM12O43184 909 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 TBL1XO60907 577 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 SLC22A3O75751 556 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 PGLSO95336 258 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 OLFM2O95897 454 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 CD160O95971 181 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 CLPTM1O96005 669 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 PFKLP17858 780 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 TSPAN8P19075 237 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 ITGALP20701 1170 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 CAPN3P20807 821 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 PEX19P40855 299 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 FOXA1P55317 472 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 TWF1Q12792 350 aa11.84□□□□□ -0.51
ATM-222ENST00000533733 MAD2L1Q13257 205 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms