RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 FABP3P05413 133 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 ELFN1P0C7U0 828 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 AMD1P17707 334 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 SPAM1P38567 509 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 PBX3P40426 434 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 CTSKP43235 329 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 OMPP47874 163 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 SLC18A1P54219 525 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 MANFP55145 182 aaKnown RBP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 TAS2R41P59536 307 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 DLG1Q12959 904 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 C5orf22Q49AR2 442 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 MAP1SQ66K74 1059 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 SCIMPQ6UWF3 145 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 BEND5Q7L4P6 421 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 OAFQ86UD1 273 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 AKAP14Q86UN6 197 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 HPS6Q86YV9 775 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 RAVER1Q8IY67 606 aaKnown RBP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 TTPALQ9BTX7 342 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 MAGEH1Q9H213 219 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 WDR55Q9H6Y2 383 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 MARCH7Q9H992 704 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 INTS7Q9NVH2 962 aaKnown RBP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 DMAC2Q9NW81 257 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 IGSF9Q9P2J2 1179 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 TBC1D14Q9P2M4 693 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 ZNHIT2Q9UHR6 403 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 NPEPPSL1A6NEC2 478 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 ATG13O75143 517 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 ADH1CP00326 375 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 LYNP07948 512 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 NAT1P18440 290 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 SDC2P34741 201 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 RPS9P46781 194 aaKnown RBP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 CBX2Q14781 532 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 DLG2Q15700 870 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 TCEAL5Q5H9L2 206 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 SLC25A24Q6NUK1 477 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 KLHL35Q6PF15 583 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 FAM151BQ6UXP7 276 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 RPTNQ6XPR3 784 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 DNAJB7Q7Z6W7 309 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 PIGWQ7Z7B1 504 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 ZZZ3Q8IYH5 903 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 MPP5Q8N3R9 675 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 TMEM199Q8N511 208 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 NIPA2Q8N8Q9 360 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 MINDY2Q8NBR6 621 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 LPGAT1Q92604 370 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 SLCO2A1Q92959 643 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 AGAP2Q99490 1192 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 OGDHLQ9ULD0 1010 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 ASF1AQ9Y294 204 aa6.97□□□□□ -1.29
CTNND1-236ENST00000533667 MRPS23Q9Y3D9 190 aaKnown RBP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 MAFBQ9Y5Q3 323 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-236ENST00000533667 CAPN8A6NHC0 703 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 E9PAM4 449 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 LOC110117498-PIK3R3F6TDL0 507 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 CACNB4O00305 520 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-236ENST00000533667 SLC7A4O43246 635 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 CCNE2O96020 404 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 PENKP01210 267 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-236ENST00000533667 TM4SF1P30408 202 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 BUD31P41223 144 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-236ENST00000533667 LSM3P62310 102 aaKnown RBP6.96□□□□□ -1.29
CTNND1-236ENST00000533667 GBE1Q04446 702 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 CLCQ05315 142 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 HERC3Q15034 1050 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 ARL13AQ5H913 290 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-236ENST00000533667 GCNT6Q5T4J0 391 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 LPCAT4Q643R3 524 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 REP15Q6BDI9 236 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 CES5AQ6NT32 575 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 CRTC3Q6UUV7 619 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 DEF8Q6ZN54 512 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 NXNL1Q96CM4 212 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 NARS2Q96I59 477 aaKnown RBP6.96□□□□□ -1.29
CTNND1-236ENST00000533667 RHBGQ9H310 441 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 SMURF2Q9HAU4 748 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 SGK2Q9HBY8 427 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 ZNF304Q9HCX3 659 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 PHF11Q9UIL8 331 aa6.96□□□□□ -1.29
CTNND1-236ENST00000533667 NOCTQ9UK39 431 aaKnown RBP6.96□□□□□ -1.29
CTNND1-236ENST00000533667 FADS2P1A8MWK0 482 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 WNT7AO00755 349 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 KHDRBS3O75525 346 aaKnown RBP6.96□□□□□ -1.3
CTNND1-236ENST00000533667 CD52P31358 61 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 SCNN1AP37088 669 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 RPL26P61254 145 aaKnown RBP6.96□□□□□ -1.3
CTNND1-236ENST00000533667 AP1S1P61966 158 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 LIPEQ05469 1076 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 CCNYL2Q5T2Q4 361 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 RNF44Q7L0R7 432 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 SPATA6LQ8N4H0 392 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 BANPQ8N9N5 519 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 C11orf65Q8NCR3 313 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 TRPV1Q8NER1 839 aa6.96□□□□□ -1.3
CTNND1-236ENST00000533667 OR4K2Q8NGD2 314 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms