RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 NFATC2Q13469 925 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 CASP8Q14790 479 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 ENPP7Q6UWV6 458 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 CES3Q6UWW8 571 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 SNX20Q7Z614 316 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 PARGQ86W56 976 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 OR56A4Q8NGH8 313 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 GAREM1Q9H706 876 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 ASB8Q9H765 288 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 VIPAS39Q9H9C1 493 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 DNAAF2Q9NVR5 837 aaKnown RBP12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 TMEM98Q9Y2Y6 226 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 TEX264Q9Y6I9 313 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 ZCWPW2A0A1B0GU75 182 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 OR51F1A6NGY5 319 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 EBAG9O00559 213 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 FOXD2O60548 495 aaPredicted RBP12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 NME1P15531 152 aaKnown RBP12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 HTR1BP28222 390 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 ARCN1P48444 511 aaKnown RBP12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 ITGA9Q13797 1035 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 HIF1AQ16665 826 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 ANKRD20A4Q4UJ75 823 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 ZNF542PQ5EBM4 170 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 ZNF648Q5T619 568 aaPredicted RBP12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 KANSL1Q7Z3B3 1105 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 ADGRG6Q86SQ4 1221 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 PIANPQ8IYJ0 282 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 MINDY1Q8N5J2 469 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 DDHD1Q8NEL9 900 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 FBXO25Q8TCJ0 367 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 TSACCQ96A04 125 aaPredicted RBP12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 EBNA1BP2Q99848 306 aaKnown RBP12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 TCEAL2Q9H3H9 227 aaPredicted RBP12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 FAM96AQ9H5X1 160 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 EPB41L5Q9HCM4 733 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 TRIM39Q9HCM9 518 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 MRPL40Q9NQ50 206 aaKnown RBP12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 PCYT1BQ9Y5K3 369 aaPredicted RBP12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 DGKBQ9Y6T7 804 aa12.6□□□□□ -0.39
RPUSD4-208ENST00000533628 CHUKO15111 745 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 GDF9O60383 454 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 DFNA5O60443 496 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 DNAJC6O75061 913 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 SLC25A14O95258 325 aaPredicted RBP12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 GOT2P00505 430 aaKnown RBP12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 KELP23276 732 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 PLTPP55058 493 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 ARL4CP56559 192 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 SRP54P61011 504 aaKnown RBP12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 CAV1Q03135 178 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 BBS9Q3SYG4 887 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 GPR33Q49SQ1 333 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 GPRC6AQ5T6X5 926 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 KIAA0930Q6ICG6 404 aaPredicted RBP12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 PSAPL1Q6NUJ1 521 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 PDIK1LQ8N165 341 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 OXR1Q8N573 874 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 ITFG2Q969R8 447 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 CCDC97Q96F63 343 aaPredicted RBP12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 STAMBPL1Q96FJ0 436 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 PDXPQ96GD0 296 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 EDEM2Q9BV94 578 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 GTPBP2Q9BX10 602 aaKnown RBP12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 ATXN10Q9UBB4 475 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 KNL1Q8NG31 2342 aa12.59□□□□□ -0.39
RPUSD4-208ENST00000533628 USP1O94782 785 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 CER1O95813 267 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 ZNF883P0CG24 379 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 ECHS1P30084 290 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 ELK3P41970 407 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 HK3P52790 923 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 CACNG1Q06432 222 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 SEMA3AQ14563 771 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 WLSQ5T9L3 541 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 DBX2Q6ZNG2 339 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 PHYKPLQ8IUZ5 450 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 PHACTR4Q8IZ21 702 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 RBFAQ8N0V3 343 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 NXPE1Q8N323 547 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 PNPLA1Q8N8W4 532 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 N4BP2L2Q92802 583 aaPredicted RBP12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 LRRC39Q96DD0 335 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 FAM122AQ96E09 287 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 PLCD4Q9BRC7 762 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 DNAJC28Q9NX36 388 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 SAMD15Q9P1V8 674 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 KLQ9UEF7 1012 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 SLC30A1Q9Y6M5 507 aa12.58□□□□□ -0.39
RPUSD4-208ENST00000533628 EP300Q09472 2414 aaPredicted RBP12.58□□□□□ -0.4
RPUSD4-208ENST00000533628 IGLV3-16A0A075B6K0 115 aa12.58□□□□□ -0.4
RPUSD4-208ENST00000533628 PRSS38A1L453 326 aa12.58□□□□□ -0.4
RPUSD4-208ENST00000533628 MTX2O75431 263 aa12.58□□□□□ -0.4
RPUSD4-208ENST00000533628 ZNF8P17098 575 aaPredicted RBP12.58□□□□□ -0.4
RPUSD4-208ENST00000533628 PGAM1P18669 254 aa12.58□□□□□ -0.4
RPUSD4-208ENST00000533628 ITGALP20701 1170 aa12.58□□□□□ -0.4
RPUSD4-208ENST00000533628 B4GALNT1Q00973 533 aa12.58□□□□□ -0.4
RPUSD4-208ENST00000533628 PPARDQ03181 441 aa12.58□□□□□ -0.4
RPUSD4-208ENST00000533628 BNIP3Q12983 259 aa12.58□□□□□ -0.4
RPUSD4-208ENST00000533628 FASTKD3Q14CZ7 662 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms