RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SLC25A51Q9H1U9 297 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 RDH14Q9HBH5 336 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 CYP4F12Q9HCS2 524 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 AKAP7Q9P0M2 348 aaPredicted RBP8.66□□□□□ -1.02
COPB1-210ENST00000533533 UNC79Q9P2D8 2635 aa8.66□□□□□ -1.02
COPB1-210ENST00000533533 A0A0U1RQS6 177 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 TCRBV7S2A1N4TA0A589 114 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 PRSS38A1L453 326 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 NPIPB15A6NHN6 443 aaPredicted RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 STMND1H3BQB6 276 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 PDE2AO00408 941 aaPredicted RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 HGSO14964 777 aaPredicted RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 MMP2P08253 660 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 CCL4P13236 92 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 MSNP26038 577 aaKnown RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 ALDH4A1P30038 563 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 OR1D5P58170 312 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 TLE1Q04724 770 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 SNX1Q13596 522 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 PRPSAP1Q14558 356 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 IHHQ14623 411 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 NR1D2Q14995 579 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 CNGA3Q16281 694 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 CLPPQ16740 277 aaPredicted RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 AMZ1Q400G9 498 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 ALG1LQ6GMV1 187 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 ITPRIPL1Q6GPH6 555 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 PNCKQ6P2M8 343 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 ZNF438Q7Z4V0 828 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 TSPAN33Q86UF1 283 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 C17orf82Q86X59 251 aaPredicted RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 SLC13A5Q86YT5 568 aaPredicted RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 REXO1L1PQ8IX06 675 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 PELI3Q8N2H9 469 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 SLC35F6Q8N357 371 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 TAB3Q8N5C8 712 aaPredicted RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 SLC25A41Q8N5S1 370 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 FAM71DQ8N9W8 422 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 IPMKQ8NFU5 416 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 CCDC110Q8TBZ0 833 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 GPBAR1Q8TDU6 330 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 UBE2Q2Q8WVN8 375 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 PIH1D2Q8WWB5 315 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 C1orf54Q8WWF1 131 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 JPH3Q8WXH2 748 aaPredicted RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 ATG4AQ8WYN0 398 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 SCRN2Q96FV2 425 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 IMP4Q96G21 291 aaKnown RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 VAT1Q99536 393 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 NUDT22Q9BRQ3 303 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 MLPHQ9BV36 600 aaPredicted RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 SLC12A9Q9BXP2 914 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 CARD9Q9H257 536 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 ADNPQ9H2P0 1102 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 WDR26Q9H7D7 661 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 SPATS2LQ9NUQ6 558 aaKnown RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 FAM153AQ9UHL3 310 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 MOSPD1Q9UJG1 213 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 TRHDEQ9UKU6 1024 aa8.65□□□□□ -1.02
COPB1-210ENST00000533533 R3HDM2Q9Y2K5 976 aaKnown RBP8.65□□□□□ -1.02
COPB1-210ENST00000533533 IGHV5-10-1A0A0J9YXX1 117 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 A0A0J9YYE9 177 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 C1orf232A0A0U1RR37 186 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 RHPN2P1A8MT19 583 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 ZW10O43264 779 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 FZD6O60353 706 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 HEXIM1O94992 359 aaKnown RBP8.64□□□□□ -1.03
COPB1-210ENST00000533533 TRBC1P01850 177 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 FGGP02679 453 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 FGF1P05230 155 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 PIRTP0C851 137 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 FGF3P11487 239 aaPredicted RBP8.64□□□□□ -1.03
COPB1-210ENST00000533533 MYCLP1P12525 358 aaPredicted RBP8.64□□□□□ -1.03
COPB1-210ENST00000533533 HOXB1P14653 301 aaPredicted RBP8.64□□□□□ -1.03
COPB1-210ENST00000533533 GM2AP17900 193 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 CD1CP29017 333 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 CD68P34810 354 aaPredicted RBP8.64□□□□□ -1.03
COPB1-210ENST00000533533 GPR3P46089 330 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 ATP1A2P50993 1020 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 ARSDP51689 593 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 MAZP56270 477 aaKnown RBP8.64□□□□□ -1.03
COPB1-210ENST00000533533 WNT3AP56704 352 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 CDK18Q07002 472 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 ILF3Q12906 894 aaKnown RBP eCLIP8.64□□□□□ -1.03
COPB1-210ENST00000533533 QPCTQ16769 361 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 LONRF2Q1L5Z9 754 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 ANKRD20A2Q5SQ80 823 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 ANKRD20A1Q5TYW2 823 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 ANKRD20A3Q5VUR7 823 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 LRRC66Q68CR7 880 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 ARHGEF18Q6ZSZ5 1173 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 HSD11B1LQ7Z5J1 315 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 NRROSQ86YC3 692 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 RCBTB1Q8NDN9 531 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 CCHCR1Q8TD31 782 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 ZDHHC1Q8WTX9 485 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 NKD1Q969G9 470 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 PMEPA1Q969W9 287 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 NUS1Q96E22 293 aa8.64□□□□□ -1.03
COPB1-210ENST00000533533 HS3ST6Q96QI5 342 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms