RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 PNPLA2Q96AD5 504 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 IQCDQ96DY2 449 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 CARD9Q9H257 536 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 PDE7BQ9NP56 450 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 SLAMF7Q9NQ25 335 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 SPTLC3Q9NUV7 552 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 POT1Q9NUX5 634 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 OGFRQ9NZT2 677 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 KCNK6Q9Y257 313 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 SLC5A6Q9Y289 635 aa12.27□□□□□ -0.45
CAPN1-223ENST00000533079 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.27□□□□□ -0.45
CAPN1-223ENST00000533079 OTOGQ6ZRI0 2925 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 LGALS16A8MUM7 142 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 SNX2O60749 519 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 CEACAM4O75871 244 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 PEX11BO96011 259 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 TPM2P07951 284 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 ACP5P13686 325 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 TNFAIP3P21580 790 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 PTPN4P29074 926 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 STC1P52823 247 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 CDH6P55285 790 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 RPS15P62841 145 aaKnown RBP12.26□□□□□ -0.45
CAPN1-223ENST00000533079 SH3BP2P78314 561 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 PTSQ03393 145 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 TRIM14Q14142 442 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 EIF2S3LQ2VIR3 472 aaKnown RBP12.26□□□□□ -0.45
CAPN1-223ENST00000533079 CPZQ66K79 652 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 PPP1R2P3Q6NXS1 205 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 TMEM26Q6ZUK4 368 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 RHOT1Q8IXI2 618 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 PGBD5Q8N414 524 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 TTC13Q8NBP0 860 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 PRR7Q8TB68 274 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 PIH1D2Q8WWB5 315 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 KLHL6Q8WZ60 621 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 SCAMP4Q969E2 229 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 MOCOSQ96EN8 888 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 ZDHHC12Q96GR4 267 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 C5orf34Q96MH7 638 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 ZNF830Q96NB3 372 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-223ENST00000533079 TGM7Q96PF1 710 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 PCDHB18PQ96TA0 734 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 SNRNP25Q9BV90 132 aaKnown RBP12.26□□□□□ -0.45
CAPN1-223ENST00000533079 RAB33BQ9H082 229 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 ING2Q9H160 280 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 ZWILCHQ9H900 591 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 RRAGDQ9NQL2 400 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-223ENST00000533079 GPATCH2LQ9NWQ4 482 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 EPHA6Q9UF33 1036 aa12.26□□□□□ -0.45
CAPN1-223ENST00000533079 ERRFI1Q9UJM3 462 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-223ENST00000533079 SHANK1Q9Y566 2161 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 A0A0J9YYE9 177 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 SSU72P8A0A1W2PR75 194 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 NUAK1O60285 661 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 FZD6O60353 706 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 MTA2O94776 668 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 VIPP01282 170 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 TRBC1P01850 177 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 ATP1A1P05023 1023 aaKnown RBP12.25□□□□□ -0.45
CAPN1-223ENST00000533079 AMD1P17707 334 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 CTPS1P17812 591 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 NELFEP18615 380 aaKnown RBP12.25□□□□□ -0.45
CAPN1-223ENST00000533079 LPOP22079 712 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-223ENST00000533079 CA4P22748 312 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 COL8A1P27658 744 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 MMP13P45452 471 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 SEPHS1P49903 392 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 CCZ1BP86790 482 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 CCZ1P86791 482 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-223ENST00000533079 DPYSQ14117 519 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 CA9Q16790 459 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 ZRANB3Q5FWF4 1079 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 MARC1Q5VT66 337 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 C1QL3Q5VWW1 255 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 SLC6A19Q695T7 634 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 TRIM48Q8IWZ4 208 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 ATPAF2Q8N5M1 289 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 Q8NA96 180 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 TCTN2Q96GX1 697 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 PLEKHG4BQ96PX9 1271 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 KCTD15Q96SI1 283 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-223ENST00000533079 AGAP2Q99490 1192 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 RIOK2Q9BVS4 552 aaKnown RBP12.25□□□□□ -0.45
CAPN1-223ENST00000533079 HAUS2Q9NVX0 235 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 RARRES3Q9UL19 164 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 PRKAB1Q9Y478 270 aa12.25□□□□□ -0.45
CAPN1-223ENST00000533079 PCYT1BQ9Y5K3 369 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-223ENST00000533079 TTC24A2A3L6 582 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-223ENST00000533079 RGSL1A5PLK6 1076 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 ARGFXA6NJG6 315 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 GRID2O43424 1007 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 PRPSAP2O60256 369 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 MAFKO60675 156 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 SKILP12757 684 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 PSMA2P25787 234 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 SERPINB6P35237 376 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 EPHB1P54762 984 aa12.24□□□□□ -0.45
CAPN1-223ENST00000533079 POLR2FP61218 127 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms