RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 HTRA2O43464 458 aaPredicted RBP8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 NDUFS3O75489 264 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 EEDO75530 441 aaKnown RBP8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 TIPRLO75663 272 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 CLPTM1O96005 669 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 ALDH1A1P00352 501 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 PYGLP06737 847 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 RHOCP08134 193 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 UROSP10746 265 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 ETS2P15036 469 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 CORO1AP31146 461 aaKnown RBP8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 MC4RP32245 332 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 GRIA3P42263 894 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 APLP1P51693 650 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 CLCN7P51798 805 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 PRKCQQ04759 706 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 BNIP2Q12982 314 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 PTPRRQ15256 657 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 PDCD4Q53EL6 469 aaKnown RBP8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 NHSL2Q5HYW2 709 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 HECTD3Q5T447 861 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 BORAQ6PGQ7 559 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 ISLR2Q6UXK2 745 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 AMIGO2Q86SJ2 522 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 PTRH1Q86Y79 214 aaKnown RBP8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 NPAS4Q8IUM7 802 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 EPHX4Q8IUS5 362 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 SIDT2Q8NBJ9 832 aaKnown RBP8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 PDZD8Q8NEN9 1154 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 LPCAT1Q8NF37 534 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 KCNJ9Q92806 393 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 TUBGCP3Q96CW5 907 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 EID2BQ96D98 161 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 DGCR14Q96DF8 476 aaKnown RBP8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 MYRFLQ96LU7 910 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 KLF16Q9BXK1 252 aaPredicted RBP8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 ANKRD60Q9BZ19 345 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 NOL11Q9H8H0 719 aaKnown RBP8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 STARD7Q9NQZ5 370 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 AGPAT4Q9NRZ5 378 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 ACTR3BQ9P1U1 418 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 LHX3Q9UBR4 397 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 SRRDQ9UH36 339 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 PHF24Q9UPV7 400 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 VPS9D1Q9Y2B5 631 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 TIMM22Q9Y584 194 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 SNX13Q9Y5W8 968 aa8.22□□□□□ -1.09
TRIM53BP-201ENST00000532912 COL4A6Q14031 1691 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 SCN8AQ9UQD0 1980 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 PLOD2O00469 737 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 BTN3A1O00481 513 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 SOCS2O14508 198 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 ANGPT2O15123 496 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 ARPC2O15144 300 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 VPS26AO75436 327 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 TMCC1O94876 653 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 SEC24AO95486 1093 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 PRAMEF12O95522 483 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 MLYCDO95822 493 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 CYBBP04839 570 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 SPATA31D3P0C874 917 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 HSPA8P11142 646 aaKnown RBP8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 CKMT2P17540 419 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 PSMC3P17980 439 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 IL12AP29459 219 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 TTPAP49638 278 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 SP3Q02447 781 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 CAPRIN1Q14444 709 aaKnown RBP8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 GEN1Q17RS7 908 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 SLC5A9Q2M3M2 681 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 MYLK3Q32MK0 819 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 PAGE3Q5JUK9 113 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 INTS11Q5TA45 600 aaKnown RBP8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 IYDQ6PHW0 289 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 Q6ZSR9 355 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 SPATA31D4Q6ZUB0 917 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 ADGRG5Q8IZF4 528 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 MFSD2AQ8NA29 543 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 GRIN3AQ8TCU5 1115 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 EEF1AKMT1Q8WVE0 214 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 ISG20Q96AZ6 181 aaKnown RBP8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 PDLIM5Q96HC4 596 aaKnown RBP8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 ZNF382Q96SR6 550 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 PRPF18Q99633 342 aaKnown RBP8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 CIB1Q99828 191 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 TRIM54Q9BYV2 358 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 RNF38Q9H0F5 515 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 CCDC68Q9H2F9 335 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 IL1RL2Q9HB29 575 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 GKN1Q9NS71 199 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 OLAHQ9NV23 265 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 TMEM45AQ9NWC5 275 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 IL17CQ9P0M4 197 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 DNMT3BQ9UBC3 853 aaKnown RBP8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 TMCO1Q9UM00 188 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 OR51B4Q9Y5P0 310 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 BACE2Q9Y5Z0 518 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 COMMD10Q9Y6G5 202 aa8.21□□□□□ -1.09
TRIM53BP-201ENST00000532912 KIAA1671Q9BY89 1806 aa8.21□□□□□ -1.1
TRIM53BP-201ENST00000532912 ZNF106Q9H2Y7 1883 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms