RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 H7C0S8 307 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 CCL22O00626 93 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 MAGEA6P43360 314 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 CDK16Q00536 496 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 GPS1Q13098 491 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 NFATC2Q13469 925 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 CCDC38Q502W7 563 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 LDLRAP1Q5SW96 308 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 GPRC6AQ5T6X5 926 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 EFL1Q7Z2Z2 1120 aaKnown RBP19.62■□□□□ 0.73
CPSF1-209ENST00000532725 ZNF547Q8IVP9 402 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 DDHD1Q8NEL9 900 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 GDAP1Q8TB36 358 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 CAPZA3Q96KX2 299 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 RANBP9Q96S59 729 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 KLK13Q9UKR3 277 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 CEP295Q9C0D2 2601 aa19.62■□□□□ 0.73
CPSF1-209ENST00000532725 TCRBV7S3A2A0A539 114 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 GAS8O95995 478 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 TPSB2P20231 275 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 ADRA1DP25100 572 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 ACTR1BP42025 376 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 ACTR1AP61163 376 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 SEPT6Q14141 434 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 HLTFQ14527 1009 aaKnown RBP eCLIP19.61■□□□□ 0.73
CPSF1-209ENST00000532725 TPSAB1Q15661 275 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 SKIDA1Q1XH10 827 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 PERM1Q5SV97 790 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 TMPRSS12Q86WS5 348 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 ZDHHC1Q8WTX9 485 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 SLC23A2Q9UGH3 650 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 NEUROG3Q9Y4Z2 214 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 RP1P56715 2156 aa19.61■□□□□ 0.73
CPSF1-209ENST00000532725 HEATR9A2RTY3 570 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 B4DGG1 531 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 KMOO15229 486 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 OPA1O60313 960 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 ACP5P13686 325 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 VPS41P49754 854 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 CLCNKAP51800 687 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 CLDN6P56747 220 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 ETF1P62495 437 aaKnown RBP19.6■□□□□ 0.73
CPSF1-209ENST00000532725 INSM1Q01101 510 aaPredicted RBP19.6■□□□□ 0.73
CPSF1-209ENST00000532725 LAMB3Q13751 1172 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 KCNJ11Q14654 390 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 C14orf28Q4W4Y0 310 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 CCNI2Q6ZMN8 369 aaPredicted RBP19.6■□□□□ 0.73
CPSF1-209ENST00000532725 MICALCLQ6ZW33 695 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 SNX20Q7Z614 316 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 C11orf96Q7Z7L8 435 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 NAGSQ8N159 534 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 GALNT15Q8N3T1 639 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 RASGEF1AQ8N9B8 481 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 OR6C4Q8NGE1 309 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 GRK7Q8WTQ7 553 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 NAT6Q93015 286 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 TTC25Q96NG3 672 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 DDX47Q9H0S4 455 aaKnown RBP19.6■□□□□ 0.73
CPSF1-209ENST00000532725 FAM96AQ9H5X1 160 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 PCYOX1Q9UHG3 505 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 RIMKLBQ9ULI2 386 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 MSRB2Q9Y3D2 182 aa19.6■□□□□ 0.73
CPSF1-209ENST00000532725 BPTFQ12830 3046 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 TRBV5-4A0A0C4DH59 114 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 PRR19A6NJB7 356 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 AP3B1O00203 1094 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 ECEL1O95672 775 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 EML2O95834 649 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 GLB1P16278 677 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 ZNF7P17097 686 aaPredicted RBP19.59■□□□□ 0.73
CPSF1-209ENST00000532725 MC4RP32245 332 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 NPY2RP49146 381 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 CDKN1CP49918 316 aaPredicted RBP19.59■□□□□ 0.73
CPSF1-209ENST00000532725 ARSDP51689 593 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 GPR33Q49SQ1 333 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 TSTD2Q5T7W7 516 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 LRRC8BQ6P9F7 803 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 CRTC3Q6UUV7 619 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 ZNF534Q76KX8 674 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 LRRTM4Q86VH4 590 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 MARCH9Q86YJ5 346 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 CACTIN-AS1Q8N1I8 211 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 ARL14Q8N4G2 192 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 OR13J1Q8NGT2 312 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 CPT1BQ92523 772 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 SLCO2A1Q92959 643 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 ZNF778Q96MU6 729 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 KLC4Q9NSK0 619 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 RNF14Q9UBS8 474 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 TBC1D29Q9UFV1 150 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 RABGEF1Q9UJ41 708 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 KCNK6Q9Y257 313 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 SLC30A1Q9Y6M5 507 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 PTPRBP23467 1997 aa19.59■□□□□ 0.73
CPSF1-209ENST00000532725 CCDC78A2IDD5 438 aa19.58■□□□□ 0.72
CPSF1-209ENST00000532725 ITGALP20701 1170 aa19.58■□□□□ 0.72
CPSF1-209ENST00000532725 PTGIRP43119 386 aa19.58■□□□□ 0.72
CPSF1-209ENST00000532725 CTSCP53634 463 aa19.58■□□□□ 0.72
CPSF1-209ENST00000532725 TERF1P54274 439 aa19.58■□□□□ 0.72
CPSF1-209ENST00000532725 SESN2P58004 480 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms