RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 TXNDC11Q6PKC3 985 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 SLC44A1Q8WWI5 657 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 CDKN2AIPNLQ96HQ2 116 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 DNAJC11Q9NVH1 559 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 SLC17A6Q9P2U8 582 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 STK16O75716 305 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 ESR1P03372 595 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 ZNF8P17098 575 aaPredicted RBP15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 LBPP18428 481 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 PAGE2Q7Z2X7 111 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 AIF1LQ9BQI0 150 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 MTG2Q9H4K7 406 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 C8orf33Q9H7E9 229 aaPredicted RBP15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 NCDNQ9UBB6 729 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 HOXD8P13378 290 aaPredicted RBP15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 ERN2Q76MJ5 926 aaKnown RBP15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 PIWIL4Q7Z3Z4 852 aaKnown RBP15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 CNDP1Q96KN2 507 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 GDE1Q9NZC3 331 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 TMCO1Q9UM00 188 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 FOXO6A8MYZ6 492 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 LYPLA1O75608 230 aaPredicted RBP15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 SERPINI2O75830 405 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 CCNDBP1O95273 360 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 TNFRSF8P28908 595 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 SPDYCQ5MJ68 293 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 VPS50Q96JG6 964 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 SLC2A6Q9UGQ3 507 aa15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 FAF1Q9UNN5 650 aaPredicted RBP15.6■□□□□ 0.09
PPFIA1-222ENST00000532504 TNFP01375 233 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 EPORP19235 508 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 CLCNKAP51800 687 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 BST1Q10588 318 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 PTCRAQ6ISU1 281 aaPredicted RBP15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 FSTL4Q6MZW2 842 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 CLDN19Q8N6F1 224 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 KLHDC7BQ96G42 594 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 LMAN1LQ9HAT1 526 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 MARCH5Q9NX47 278 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 CFAP73A6NFT4 308 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 SASH3O75995 380 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 SOX9P48436 509 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 NFATC2Q13469 925 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 AGGF1Q8N302 714 aaeCLIP15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 EME1Q96AY2 570 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 ZSCAN5AQ9BUG6 496 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 CCDC177Q9NQR7 707 aaPredicted RBP15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 EIF2B3Q9NR50 452 aaKnown RBP15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 NIPSNAP2O75323 286 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 HGFP14210 728 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 FECHP22830 423 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 SERPINB3P29508 390 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 NTSR1P30989 418 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 DSC1Q08554 894 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 MINDY4Q4G0A6 757 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 LIPMQ5VYY2 423 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 RNF148Q8N7C7 305 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 GLIS1Q8NBF1 620 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 C12orf65Q9H3J6 166 aaKnown RBP15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 ZNF334Q9HCZ1 680 aaPredicted RBP15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 SLC17A7Q9P2U7 560 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 DNMT3BQ9UBC3 853 aaKnown RBP15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 DDX60LQ5H9U9 1706 aaKnown RBP15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 ATP6V1C1P21283 382 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 UNC5BQ8IZJ1 945 aa15.59■□□□□ 0.09
PPFIA1-222ENST00000532504 COL4A5P29400 1685 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 A0A1B0GUL6 1792 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 PLK4O00444 970 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 VPS4BO75351 444 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 ESRRGP62508 458 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 TSNQ15631 228 aaKnown RBP15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 CHSY3Q70JA7 882 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 PATL1Q86TB9 770 aaKnown RBP15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 TMCO5AQ8N6Q1 288 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 FIG4Q92562 907 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 TCF12Q99081 682 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 SH3GL1Q99961 368 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 TBCDQ9BTW9 1192 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 OR10H1Q9Y4A9 318 aa15.58■□□□□ 0.09
PPFIA1-222ENST00000532504 ATF6P18850 670 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 CMPK1P30085 196 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 KIAA0930Q6ICG6 404 aaPredicted RBP15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 BNC2Q6ZN30 1099 aaPredicted RBP15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 KIAA0408Q6ZU52 694 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 SHKBP1Q8TBC3 707 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 ZCCHC10Q8TBK6 192 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 SCAMP4Q969E2 229 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 RAD51AP1Q96B01 352 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 FCHO1O14526 889 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 AZIN1O14977 448 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 LIMK2P53671 638 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 SLC16A1P53985 500 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 TAS2R39P59534 338 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 MBTPS1Q14703 1052 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 DSELQ8IZU8 1212 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 GALNT4Q8N4A0 578 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 COL5A3P25940 1745 aaPredicted RBP15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 POP7O75817 140 aaKnown RBP15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 TTMPQ5BVD1 217 aa15.58■□□□□ 0.08
PPFIA1-222ENST00000532504 ZNF805Q5CZA5 627 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms