RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SLC25A11Q02978 314 aaKnown RBP17.1■□□□□ 0.33
PKP3-208ENST00000531857 NIPAL4Q0D2K0 466 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 GALNT2Q10471 571 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 ERV3-1Q14264 604 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 KIR2DS5Q14953 304 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 ZNF648Q5T619 568 aaPredicted RBP17.1■□□□□ 0.33
PKP3-208ENST00000531857 TMEM135Q86UB9 458 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 PLXDC1Q8IUK5 500 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 GALNT6Q8NCL4 622 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 MAML1Q92585 1016 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 C9orf72Q96LT7 481 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 PLEKHG4BQ96PX9 1271 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 ISCUQ9H1K1 167 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 FAM83DQ9H4H8 585 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 RMI1Q9H9A7 625 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 RBM22Q9NW64 420 aaKnown RBP eCLIP17.1■□□□□ 0.33
PKP3-208ENST00000531857 SCHIP1Q9P0W5 487 aaPredicted RBP17.1■□□□□ 0.33
PKP3-208ENST00000531857 ATXN10Q9UBB4 475 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 CROTQ9UKG9 612 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 TTLL3Q9Y4R7 772 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 KCTD3Q9Y597 815 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 SLC30A1Q9Y6M5 507 aa17.1■□□□□ 0.33
PKP3-208ENST00000531857 AKR1B15C9JRZ8 316 aaPredicted RBP17.09■□□□□ 0.33
PKP3-208ENST00000531857 ZSCAN12O43309 604 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 GRID2O43424 1007 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 NUAK1O60285 661 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 C9P02748 559 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 MYBL1P10243 752 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 SLC2A4P14672 509 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 ZNF8P17098 575 aaPredicted RBP17.09■□□□□ 0.33
PKP3-208ENST00000531857 PBX1P40424 430 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 PRKCIP41743 596 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 CD97P48960 835 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 SEPHS1P49903 392 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 CCZ1BP86790 482 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 CCZ1P86791 482 aaPredicted RBP17.09■□□□□ 0.33
PKP3-208ENST00000531857 KLHL30Q0D2K2 578 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 KRT81Q14533 505 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 C6orf15Q6UXA7 325 aaPredicted RBP17.09■□□□□ 0.33
PKP3-208ENST00000531857 LRRC49Q8IUZ0 686 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 RAVER1Q8IY67 606 aaKnown RBP17.09■□□□□ 0.33
PKP3-208ENST00000531857 TRIM11Q96F44 468 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 ELMO2Q96JJ3 720 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 LYSMD1Q96S90 227 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 EPB41L1Q9H4G0 881 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 PCDH9Q9HC56 1237 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 DNPEPQ9ULA0 475 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 ADGRG1Q9Y653 693 aa17.09■□□□□ 0.33
PKP3-208ENST00000531857 LILRA5A6NI73 299 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 OR5K4A6NMS3 321 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 MATN3O15232 486 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 HLA-DQB2P05538 268 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 KRT7P08729 469 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 LEPRP48357 1165 aaKnown RBP17.08■□□□□ 0.32
PKP3-208ENST00000531857 PIGHQ14442 188 aaPredicted RBP17.08■□□□□ 0.32
PKP3-208ENST00000531857 QPCTQ16769 361 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 DNTTIP2Q5QJE6 756 aaKnown RBP17.08■□□□□ 0.32
PKP3-208ENST00000531857 NCBP2-AS2Q69YL0 99 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 HIST2H2BCQ6DN03 193 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 PHYKPLQ8IUZ5 450 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 FAM71BQ8TC56 605 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 EID2BQ96D98 161 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 TGM7Q96PF1 710 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 OR6C1Q96RD1 312 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 OR2AG1Q9H205 316 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 CARD9Q9H257 536 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 OSGEPL1Q9H4B0 414 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 KLC4Q9NSK0 619 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 DTLQ9NZJ0 730 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 ZNF624Q9P2J8 865 aaPredicted RBP17.08■□□□□ 0.32
PKP3-208ENST00000531857 SLC23A2Q9UGH3 650 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 PCDHB3Q9Y5E6 796 aa17.08■□□□□ 0.32
PKP3-208ENST00000531857 SPTBN1Q01082 2364 aaKnown RBP17.08■□□□□ 0.32
PKP3-208ENST00000531857 MKRN2OSH3BPM6 223 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 KIF1CO43896 1103 aaKnown RBP17.07■□□□□ 0.32
PKP3-208ENST00000531857 KATNA1O75449 491 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 KIAA0754O94854 1291 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 UBXN7O94888 489 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 XRCC1P18887 633 aaPredicted RBP17.07■□□□□ 0.32
PKP3-208ENST00000531857 CES1P23141 567 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 SLC19A1P41440 591 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 NOP2P46087 812 aaKnown RBP17.07■□□□□ 0.32
PKP3-208ENST00000531857 ARSEP51690 589 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 RPL26P61254 145 aaKnown RBP17.07■□□□□ 0.32
PKP3-208ENST00000531857 PAFAH1B3Q15102 231 aaKnown RBP17.07■□□□□ 0.32
PKP3-208ENST00000531857 PLA2G4EQ3MJ16 856 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 ATP13A4Q4VNC1 1196 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 C4orf17Q53FE4 359 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 ANKRD20A8PQ5CZ79 823 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 CCDC122Q5T0U0 273 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 FAM182AQ5T1J6 154 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 TIGD7Q6NT04 549 aaPredicted RBP17.07■□□□□ 0.32
PKP3-208ENST00000531857 TCTN3Q6NUS6 607 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 TMEM26Q6ZUK4 368 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 ASB18Q6ZVZ8 466 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 NIPA2Q8N8Q9 360 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 TEX19Q8NA77 164 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 THAP2Q9H0W7 228 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 UCK1Q9HA47 277 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 PKD2L2Q9NZM6 624 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms