RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SCAMP1O15126 338 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 AQP9O43315 295 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 TNFP01375 233 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 ITGALP20701 1170 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 CSRP1P21291 193 aaKnown RBP14.31□□□□□ -0.12
CPSF1-206ENST00000531480 NMBRP28336 390 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 ARCN1P48444 511 aaKnown RBP14.31□□□□□ -0.12
CPSF1-206ENST00000531480 POLD2P49005 469 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 MRPS25P82663 173 aaKnown RBP14.31□□□□□ -0.12
CPSF1-206ENST00000531480 TMPRSS15P98073 1019 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 CACNG1Q06432 222 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 MSS51Q4VC12 460 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 FNBP1LQ5T0N5 605 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 GPRC6AQ5T6X5 926 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 LVRNQ6Q4G3 990 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 HID1Q8IV36 788 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 PIANPQ8IYJ0 282 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 NXPE1Q8N323 547 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 NOA1Q8NC60 698 aaKnown RBP14.31□□□□□ -0.12
CPSF1-206ENST00000531480 HDAC10Q969S8 669 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 ULK4Q96C45 1275 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 LRRC39Q96DD0 335 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 MFSD3Q96ES6 412 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 LRRC1Q9BTT6 524 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 CARD6Q9BX69 1037 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 PHACTR1Q9C0D0 580 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 ASB8Q9H765 288 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 SUDS3Q9H7L9 328 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-206ENST00000531480 CYP4F12Q9HCS2 524 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 TMEM98Q9Y2Y6 226 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 SNX24Q9Y343 169 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 UTP11Q9Y3A2 253 aaKnown RBP14.31□□□□□ -0.12
CPSF1-206ENST00000531480 PCYT1BQ9Y5K3 369 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-206ENST00000531480 ST14Q9Y5Y6 855 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 SPTBN2O15020 2390 aa14.31□□□□□ -0.12
CPSF1-206ENST00000531480 ZCWPW2A0A1B0GU75 182 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 USP1O94782 785 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 ZNF8P17098 575 aaPredicted RBP14.3□□□□□ -0.12
CPSF1-206ENST00000531480 ACRV1P26436 265 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 GRK6P43250 576 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 B4GALNT1Q00973 533 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 IL9RQ01113 521 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 TMEM115Q12893 351 aaPredicted RBP14.3□□□□□ -0.12
CPSF1-206ENST00000531480 LRP8Q14114 963 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 PRRT3Q5FWE3 981 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 KIAA0930Q6ICG6 404 aaPredicted RBP14.3□□□□□ -0.12
CPSF1-206ENST00000531480 C8orf74Q6P047 294 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 AFTPHQ6ULP2 937 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 NRROSQ86YC3 692 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 GATAD2AQ86YP4 633 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 ZNF547Q8IVP9 402 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 FAM181AQ8N9Y4 354 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 OR4C6Q8NH72 309 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 ART4Q93070 314 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 WDR83Q9BRX9 315 aaKnown RBP14.3□□□□□ -0.12
CPSF1-206ENST00000531480 RTKNQ9BST9 563 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 NAT9Q9BTE0 207 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 TRIM31Q9BZY9 425 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 TMEM168Q9H0V1 697 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 OR2AG1Q9H205 316 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 CARS2Q9HA77 564 aaKnown RBP14.3□□□□□ -0.12
CPSF1-206ENST00000531480 NLGN3Q9NZ94 848 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 ANAPC5Q9UJX4 755 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 PCOLCE2Q9UKZ9 415 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 GPR34Q9UPC5 381 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 BTBD3Q9Y2F9 522 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 SLC30A1Q9Y6M5 507 aa14.3□□□□□ -0.12
CPSF1-206ENST00000531480 NEMP2A6NFY4 417 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 SGTAO43765 313 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 SDC3O75056 442 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 GOT2P00505 430 aaKnown RBP14.29□□□□□ -0.12
CPSF1-206ENST00000531480 CDKN1CP49918 316 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-206ENST00000531480 CLCNKAP51800 687 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 CAV1Q03135 178 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 DHX9Q08211 1270 aaKnown RBP14.29□□□□□ -0.12
CPSF1-206ENST00000531480 ELOCQ15369 112 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 UAP1L1Q3KQV9 507 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 ANKRD20A4Q4UJ75 823 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 DNAJC21Q5F1R6 531 aaKnown RBP14.29□□□□□ -0.12
CPSF1-206ENST00000531480 ZNF648Q5T619 568 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-206ENST00000531480 PSAPL1Q6NUJ1 521 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 PACS1Q6VY07 963 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 MICALCLQ6ZW33 695 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 C11orf96Q7Z7L8 435 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 GLRX5Q86SX6 157 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 NAXDQ8IW45 347 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 PDIK1LQ8N165 341 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 OR4L1Q8NH43 312 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 HEXDCQ8WVB3 486 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 FCRL3Q96P31 734 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-206ENST00000531480 OR2M4Q96R27 311 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 EBNA1BP2Q99848 306 aaKnown RBP14.29□□□□□ -0.12
CPSF1-206ENST00000531480 DUSP23Q9BVJ7 150 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 ZCCHC2Q9C0B9 1178 aaKnown RBP14.29□□□□□ -0.12
CPSF1-206ENST00000531480 PLAC1Q9HBJ0 212 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 ZDHHC3Q9NYG2 299 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 TEX264Q9Y6I9 313 aa14.29□□□□□ -0.12
CPSF1-206ENST00000531480 CNOT1A5YKK6 2376 aaKnown RBP14.29□□□□□ -0.12
CPSF1-206ENST00000531480 CCDC78A2IDD5 438 aa14.28□□□□□ -0.12
CPSF1-206ENST00000531480 OR51F1A6NGY5 319 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms