RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 AKIRIN1Q9H9L7 192 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 PDE7BQ9NP56 450 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 IGSF5Q9NSI5 407 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 FANCLQ9NW38 375 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 RBM22Q9NW64 420 aaKnown RBP eCLIP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 SIDT1Q9NXL6 827 aaKnown RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 OGFRQ9NZT2 677 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 VPS18Q9P253 973 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 ATXN10Q9UBB4 475 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 RARRES3Q9UL19 164 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 CNOT6Q9ULM6 557 aaKnown RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 FARSAQ9Y285 508 aaKnown RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 PPIL1Q9Y3C6 166 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 MAP4K5Q9Y4K4 846 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 ITPR2Q14571 2701 aa9.11□□□□□ -0.95
NEDD8-206ENST00000531430 TEP1Q99973 2627 aaKnown RBP9.11□□□□□ -0.95
NEDD8-206ENST00000531430 FADS2P1A8MWK0 482 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF185O15231 689 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 KRT86O43790 486 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 NUAK1O60285 661 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 MTA2O94776 668 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 TIAF1O95411 115 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 DDAH2O95865 285 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 FTLP02792 175 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 ANKRD34CP0C6C1 535 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF135P52742 658 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 DRG2P55039 364 aaKnown RBP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 DPYSQ14117 519 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 KCNAB1Q14722 419 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 BOLA3Q53S33 107 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 PRR30Q53SZ7 412 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 RALGPS1Q5JS13 557 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 PWWP2BQ6NUJ5 590 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF765Q7L2R6 523 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 POLNQ7Z5Q5 900 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 APLFQ8IW19 511 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 AVL9Q8NBF6 648 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 THAP4Q8WY91 577 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 RSC1A1Q92681 617 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 SLC29A3Q9BZD2 475 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 POLR1EQ9GZS1 481 aaKnown RBP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 ING2Q9H160 280 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 NUP62CLQ9H1M0 184 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 CARD9Q9H257 536 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF768Q9H5H4 540 aaKnown RBP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 PCDH9Q9HC56 1237 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 CUEDC1Q9NWM3 386 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 PKD2L2Q9NZM6 624 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF624Q9P2J8 865 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 SLC23A2Q9UGH3 650 aa9.1□□□□□ -0.95
NEDD8-206ENST00000531430 G3BP2Q9UN86 482 aaKnown RBP9.1□□□□□ -0.95
NEDD8-206ENST00000531430 NBPF19A0A087WUL8 3843 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 LILRA5A6NI73 299 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 OR52A4PA6NMU1 304 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 F5H423 210 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-206ENST00000531430 DDX3YO15523 660 aaKnown RBP9.09□□□□□ -0.95
NEDD8-206ENST00000531430 FZD6O60353 706 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 LRCH4O75427 683 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 MTX2O75431 263 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 C9P02748 559 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 RARAP10276 462 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 FGF5P12034 268 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 FOLR1P15328 257 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 XRCC1P18887 633 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-206ENST00000531430 CA4P22748 312 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 IL1R2P27930 398 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 PTPN4P29074 926 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 SERPINB6P35237 376 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 DCTP40126 519 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 SPINT3P49223 89 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF165P49910 485 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 UBE2IP63279 158 aaKnown RBP9.09□□□□□ -0.95
NEDD8-206ENST00000531430 TUBB3Q13509 450 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 RAPSNQ13702 412 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 KYNUQ16719 465 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.09□□□□□ -0.95
NEDD8-206ENST00000531430 PLEKHA7Q6IQ23 1121 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 MAMDC2Q7Z304 686 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-206ENST00000531430 PSTKQ8IV42 348 aaKnown RBP9.09□□□□□ -0.95
NEDD8-206ENST00000531430 AOPEPQ8N6M6 819 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 GDAP1Q8TB36 358 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 ENOX1Q8TC92 643 aaKnown RBP9.09□□□□□ -0.95
NEDD8-206ENST00000531430 SPOCK2Q92563 424 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 C19orf60Q96EN9 201 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 CSPG4P5Q96PW8 444 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 PHF12Q96QT6 1004 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 WDR24Q96S15 920 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 TRIM39Q9HCM9 518 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 DNPEPQ9ULA0 475 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 SHOC2Q9UQ13 582 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 ZNF451Q9Y4E5 1061 aa9.09□□□□□ -0.95
NEDD8-206ENST00000531430 MN1Q10571 1320 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-206ENST00000531430 IGHV5-51A0A0C4DH38 117 aa9.08□□□□□ -0.96
NEDD8-206ENST00000531430 UBA6A0AVT1 1052 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-206ENST00000531430 C21orf140B9A014 251 aa9.08□□□□□ -0.96
NEDD8-206ENST00000531430 KMOO15229 486 aa9.08□□□□□ -0.96
NEDD8-206ENST00000531430 TOX3O15405 576 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-206ENST00000531430 DPM1O60762 260 aa9.08□□□□□ -0.96
NEDD8-206ENST00000531430 KLK3P07288 261 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms