RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ROR2Q01974 943 aaKnown RBP7.22□□□□□ -1.25
CSDE1-213ENST00000530784 DUSP6Q16828 381 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 SYTL3Q4VX76 610 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 MARCH8Q5T0T0 291 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 KIAA1161Q6NSJ0 714 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 TMTC3Q6ZXV5 915 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 FBXL14Q8N1E6 418 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 SCAIQ8N9R8 606 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 MIB2Q96AX9 1013 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 SDCCAG3Q96C92 435 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 TMEM204Q9BSN7 226 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 FAM167BQ9BTA0 163 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 FTHL17Q9BXU8 183 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 KRTAP1-5Q9BYS1 174 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 AZI2Q9H6S1 392 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 PTPRHQ9HD43 1115 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 TLR8Q9NR97 1041 aaKnown RBP7.22□□□□□ -1.25
CSDE1-213ENST00000530784 ICKQ9UPZ9 632 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 OSGIN2Q9Y236 505 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 PTGDR2Q9Y5Y4 395 aa7.22□□□□□ -1.25
CSDE1-213ENST00000530784 TRIP12Q14669 1992 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-213ENST00000530784 LACTBL1A8MY62 500 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 INAFM1C9JVW0 142 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 RGS14O43566 566 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 MMP1P03956 469 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 NGFRP08138 427 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 T-ENOLP0DO92 83 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 CD52P31358 61 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 MLH1P40692 756 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 GRK6P43250 576 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 ENTPD1P49961 510 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 HYAL1Q12794 435 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 GPS2Q13227 327 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 TMEM268Q5VZI3 342 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 AADACL2Q6P093 401 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 CRELD2Q6UXH1 353 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-213ENST00000530784 TRILQ7L0X0 811 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 TRIM74Q86UV6 250 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 TRIM73Q86UV7 250 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 MOGAT3Q86VF5 341 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 ADHFE1Q8IWW8 467 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 CADM3Q8N126 398 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 HDAC7Q8WUI4 952 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 CCT6BQ92526 530 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 ZNF689Q96CS4 500 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-213ENST00000530784 ZBTB10Q96DT7 871 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 SDF4Q9BRK5 362 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 NTPCRQ9BSD7 190 aaKnown RBP7.21□□□□□ -1.26
CSDE1-213ENST00000530784 UPF3BQ9BZI7 483 aaKnown RBP7.21□□□□□ -1.26
CSDE1-213ENST00000530784 LSG1Q9H089 658 aaKnown RBP7.21□□□□□ -1.26
CSDE1-213ENST00000530784 HIF1ANQ9NWT6 349 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 PLK2Q9NYY3 685 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 SLC9A2Q9UBY0 812 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 TRPV2Q9Y5S1 764 aa7.21□□□□□ -1.26
CSDE1-213ENST00000530784 RALGAPA2Q2PPJ7 1873 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 B9A039 149 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 MBTPS2O43462 519 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 TBX10O75333 385 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 STAG3L1P0CL83 205 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 AVPR1AP37288 418 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 PPP3CCP48454 512 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 SLC26A2P50443 739 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 PMS2P54278 862 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 NAPAP54920 295 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 ACTR2P61160 394 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 PLCB4Q15147 1175 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 PLPPR4Q7Z2D5 763 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 WDR5BQ86VZ2 330 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 PRR26Q8N8Z3 221 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 BICD2Q8TD16 824 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 P2RX5Q93086 422 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 PCYT2Q99447 389 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 MXRA8Q9BRK3 442 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 HERPUD2Q9BSE4 406 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 LRRC2Q9BYS8 371 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 KLHL31Q9H511 634 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 RBM28Q9NW13 759 aaKnown RBP7.2□□□□□ -1.26
CSDE1-213ENST00000530784 CD207Q9UJ71 328 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 PADI3Q9ULW8 664 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 NFASCO94856 1347 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 IGSF9BQ9UPX0 1349 aa7.2□□□□□ -1.26
CSDE1-213ENST00000530784 MYH7BA7E2Y1 1941 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 TARSL2A2RTX5 802 aaKnown RBP7.19□□□□□ -1.26
CSDE1-213ENST00000530784 GTPBP1O00178 669 aaKnown RBP7.19□□□□□ -1.26
CSDE1-213ENST00000530784 LINC01565O15544 149 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 SPRY3O43610 288 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 METTL18O95568 372 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 TK1P04183 234 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 SCG2P13521 617 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 CLCNKBP51801 687 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 ZP1P60852 638 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 IRX6P78412 446 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-213ENST00000530784 ARHGAP8P85298 464 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 ITGB3BPQ13352 177 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-213ENST00000530784 CAMK1Q14012 370 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 NECTIN1Q15223 517 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 TAF5Q15542 800 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 AP5B1Q2VPB7 878 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 CEP55Q53EZ4 464 aa7.19□□□□□ -1.26
CSDE1-213ENST00000530784 Q6ZSV7 163 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms