RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	FAM151B	Q6UXP7	276 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	SPATA19	Q7Z5L4	167 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	LRRC57	Q8N9N7	239 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	GATA5	Q9BWX5	397 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ATG10	Q9H0Y0	220 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	SLC6A15	Q9H2J7	730 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	EHD1	Q9H4M9	534 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	EQTN	Q9NQ60	294 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	MARCH2	Q9P0N8	246 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	UXT	Q9UBK9	157 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	VPS51	Q9UID3	782 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ST14	Q9Y5Y6	855 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	PIK3C2A	O00443	1686 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZSCAN5B	A6NJL1	495 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	TEX28	O15482	410 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	TRBC1	P01850	177 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	IFNA6	P05013	189 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	F7	P08709	466 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ALDH3A2	P51648	485 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	WNT3A	P56704	352 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	CNTN2	Q02246	1040 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	SLC18A2	Q05940	514 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	CRTC2	Q53ET0	693 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	IDNK	Q5T6J7	187 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	TAPT1	Q6NXT6	567 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	USP30	Q70CQ3	517 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	REPS2	Q8NFH8	660 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	MFSD3	Q96ES6	412 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	SENP8	Q96LD8	212 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	MCMBP	Q9BTE3	642 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	SPATA5L1	Q9BVQ7	753 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	AASDHPPT	Q9NRN7	309 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	CPA4	Q9UI42	421 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ABCG2	Q9UNQ0	655 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	MAP4K5	Q9Y4K4	846 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	SH3D21	A4FU49	640 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	FPGT	O14772	594 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	PLIN3	O60664	434 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	SERPINB7	O75635	380 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	MC4R	P32245	332 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	MAGEA2	P43356	314 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	VBP1	P61758	197 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	EVX2	Q03828	476 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZBTB6	Q15916	424 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ADAMTSL2	Q86TH1	951 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	NDRG1	Q92597	394 aa	Known RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ESAM	Q96AP7	390 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	PPCDC	Q96CD2	204 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	TMCO6	Q96DC7	493 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	TEFM	Q96QE5	360 aa	Known RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	AARSD1	Q9BTE6	412 aa	Known RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	WDR18	Q9BV38	432 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	PRDM8	Q9NQV8	689 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ITM2C	Q9NQX7	267 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ATRN	O75882	1429 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	GSAP	A4D1B5	854 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	C5orf60	A6NFR6	353 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	GPI	P06744	558 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	XRCC1	P18887	633 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZNF135	P52742	658 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	EPHB3	P54753	998 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	FCGRT	P55899	365 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	GRSF1	Q12849	480 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	HERC3	Q15034	1050 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	USF2	Q15853	346 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZYG11A	Q6WRX3	759 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ANKS1B	Q7Z6G8	1248 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	FAM35A	Q86V20	835 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	LAPTM4B	Q86VI4	370 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	QRFPR	Q96P65	431 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	MTFR1L	Q9H019	292 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	POLE4	Q9NR33	117 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	ABCC13	Q9NSE7	274 aa		7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	IFT80	Q9P2H3	777 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNND1-223	ENST00000529986	LTN1	O94822	1766 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	MYOCOS	A0A1B0GUC4	107 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	FGF10	O15520	208 aa	Predicted RBP	7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZW10	O43264	779 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	PSMD10	O75832	226 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	DBI	P07108	87 aa	Known RBP	7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	ENTPD1	P49961	510 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	THOP1	P52888	689 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	MANF	P55145	182 aa	Known RBP	7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	SFT2D3	Q587I9	215 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	ARSH	Q5FYA8	562 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	CPTP	Q5TA50	214 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	SDHAF4	Q5VUM1	108 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	HMBOX1	Q6NT76	420 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	CPNE8	Q86YQ8	564 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	RIOX2	Q8IUF8	465 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZZZ3	Q8IYH5	903 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	C2orf73	Q8N5S3	287 aa	Predicted RBP	7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	BANP	Q8N9N5	519 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	LEMD2	Q8NC56	503 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	ERMAP	Q96PL5	475 aa	Predicted RBP	7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZNF607	Q96SK3	696 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	TMEM109	Q9BVC6	243 aa		7.57	□□□□□ -1.2
CTNND1-223	ENST00000529986	HPF1	Q9NWY4	346 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms