RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 PRPF39Q86UA1 669 aaKnown RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 RPAP2Q8IXW5 612 aaPredicted RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 DSELQ8IZU8 1212 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 INTS12Q96CB8 462 aaKnown RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 MTBPQ96DY7 904 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 MEIS3Q99687 375 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 ESRP2Q9H6T0 727 aaKnown RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 CNGB3Q9NQW8 809 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 SLCO3A1Q9UIG8 710 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 ERVK-11Q9UQG0 969 aa5.83□□□□□ -1.48
PCF11-202ENST00000528336 ZFP37Q9Y6Q3 630 aaPredicted RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 PRDM15P57071 1507 aaPredicted RBP5.83□□□□□ -1.48
PCF11-202ENST00000528336 DEPDC5O75140 1603 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 MROH1Q8NDA8 1641 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 MADDQ8WXG6 1647 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 FLT1P17948 1338 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 PLOD2O00469 737 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 IKBKBO14920 756 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 NDUFS7O75251 213 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 ZBTB11O95625 1053 aaPredicted RBP5.82□□□□□ -1.48
PCF11-202ENST00000528336 SCGB1D1O95968 90 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 NR2F1P10589 423 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 SCG2P13521 617 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 ATP5DP30049 168 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 PBX3P40426 434 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 PEX5P50542 639 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 ARF3P61204 181 aaPredicted RBP5.82□□□□□ -1.48
PCF11-202ENST00000528336 SEC61A1P61619 476 aaKnown RBP5.82□□□□□ -1.48
PCF11-202ENST00000528336 TUBA1BP68363 451 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 UBXN2AP68543 259 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 OLR1P78380 273 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 IFI35P80217 286 aaPredicted RBP5.82□□□□□ -1.48
PCF11-202ENST00000528336 ARF1P84077 181 aaKnown RBP5.82□□□□□ -1.48
PCF11-202ENST00000528336 ACVR2BQ13705 512 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 NFATC4Q14934 902 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 SLC39A14Q15043 492 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 AMZ1Q400G9 498 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 FAM69BQ5VUD6 431 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 WDR73Q6P4I2 378 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 CNSTQ6PJW8 725 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 AVL9Q8NBF6 648 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 PERPQ96FX8 193 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 SCMH1Q96GD3 660 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 OR10A4Q9H209 315 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 IL25Q9H293 177 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 HINT3Q9NQE9 182 aaKnown RBP5.82□□□□□ -1.48
PCF11-202ENST00000528336 SNX8Q9Y5X2 465 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 KDM5DQ9BY66 1539 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 PTPRMP28827 1452 aa5.82□□□□□ -1.48
PCF11-202ENST00000528336 KANK1Q14678 1352 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 ABCC3O15438 1527 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 FAM237AA0A1B0GTK4 181 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 C4orf47A7E2U8 309 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 B3GALNT1O75752 331 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 GOSR1O95249 250 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 PGM3O95394 542 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 TGDSO95455 350 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 MLYCDO95822 493 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 CLEC3BP05452 202 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 HOXB5P09067 269 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 TPD52P55327 224 aaPredicted RBP5.81□□□□□ -1.48
PCF11-202ENST00000528336 CEBPZQ03701 1054 aaKnown RBP5.81□□□□□ -1.48
PCF11-202ENST00000528336 CALD1Q05682 793 aaKnown RBP5.81□□□□□ -1.48
PCF11-202ENST00000528336 KEAP1Q14145 624 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 E2F5Q15329 346 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 SF3B4Q15427 424 aaKnown RBP eCLIP5.81□□□□□ -1.48
PCF11-202ENST00000528336 ASIC2Q16515 512 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 DPCR1Q3MIW9 517 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 SETMARQ53H47 684 aaPredicted RBP5.81□□□□□ -1.48
PCF11-202ENST00000528336 GALNT17Q6IS24 598 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 SLC36A4Q6YBV0 504 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 TMTC3Q6ZXV5 915 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 WDR63Q8IWG1 891 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 SPATA6LQ8N4H0 392 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 NGEFQ8N5V2 710 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 RTP4Q96DX8 246 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 NAF1Q96HR8 494 aaKnown RBP5.81□□□□□ -1.48
PCF11-202ENST00000528336 SLC41A2Q96JW4 573 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 SLX1AQ9BQ83 275 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 FAM110AQ9BQ89 295 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 HAUS8Q9BT25 410 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 C1QTNF5Q9BXJ0 243 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 VPS33BQ9H267 617 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 KCNN2Q9H2S1 579 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 GRPEL1Q9HAV7 217 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 KRT84Q9NSB2 600 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 COMMD8Q9NX08 183 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 SELENONQ9NZV5 590 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 CNOT8Q9UFF9 292 aaKnown RBP5.81□□□□□ -1.48
PCF11-202ENST00000528336 LIMA1Q9UHB6 759 aaKnown RBP5.81□□□□□ -1.48
PCF11-202ENST00000528336 RRP15Q9Y3B9 282 aaKnown RBP5.81□□□□□ -1.48
PCF11-202ENST00000528336 NFS1Q9Y697 457 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 PIAS3Q9Y6X2 628 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 GCC2Q8IWJ2 1684 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 SETD5Q9C0A6 1442 aa5.81□□□□□ -1.48
PCF11-202ENST00000528336 UNC13BO14795 1591 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 VWDEQ8N2E2 1590 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 LMTK2Q8IWU2 1503 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 IGLV5-37A0A075B6J1 123 aa5.8□□□□□ -1.48
PCF11-202ENST00000528336 FAM237BA0A1B0GVD1 139 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms