RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 KMOO15229 486 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 EFSO43281 561 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 CST8O60676 142 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 ITGB2P05107 769 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 HMGCLP35914 325 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 SPA17Q15506 151 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 MANEAQ5SRI9 462 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 SPOCD1Q6ZMY3 1216 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 KATNAL2Q8IYT4 538 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 GPR26Q8NDV2 337 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 GLYATL1Q969I3 302 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 RBM41Q96IZ5 413 aaKnown RBP14.03□□□□□ -0.16
CAPN1-212ENST00000527887 TEFMQ96QE5 360 aaKnown RBP14.03□□□□□ -0.16
CAPN1-212ENST00000527887 VPS35Q96QK1 796 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 CEP41Q9BYV8 373 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 HACD3Q9P035 362 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 ATXN10Q9UBB4 475 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 TRHDEQ9UKU6 1024 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 SHOC2Q9UQ13 582 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 ZNF711Q9Y462 761 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 ADGRG1Q9Y653 693 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 AHCTF1Q8WYP5 2266 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 KCNJ13O60928 360 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 PPFIA2O75334 1257 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 MT-CYBP00156 380 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-212ENST00000527887 PRB1P04280 392 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 TUBB4AP04350 444 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 FGF3P11487 239 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-212ENST00000527887 CCL4P13236 92 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 ACP5P13686 325 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 TNNT1P13805 278 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 ZNF8P17098 575 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-212ENST00000527887 XRCC1P18887 633 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-212ENST00000527887 CYLC1P35663 651 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-212ENST00000527887 PCSK7Q16549 785 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 NKAIN2Q5VXU1 208 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 C11orf63Q6NUN7 778 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 KDELC2Q7Z4H8 507 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 ADGRG6Q86SQ4 1221 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 ZNF605Q86T29 641 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 RCBTB1Q8NDN9 531 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 SPATA22Q8NHS9 363 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 BRSK1Q8TDC3 778 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 MED8Q96G25 268 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 FCRL5Q96RD9 977 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 FERMT1Q9BQL6 677 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 ZPBPQ9BS86 351 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 TIMM29Q9BSF4 260 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 OR2AG1Q9H205 316 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 FOXJ2Q9P0K8 574 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 CPNE7Q9UBL6 633 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 KCNK6Q9Y257 313 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 PRKAB1Q9Y478 270 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 SHROOM3Q8TF72 1996 aa14.02□□□□□ -0.17
CAPN1-212ENST00000527887 TRBV23OR9-2A0A075B6M9 112 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 GOLGA6L9A6NEM1 432 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 LILRA5A6NI73 299 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 PMPCBO75439 489 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 EML2O95834 649 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 SFTPCP11686 197 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 BPIP17213 487 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 CSF2RBP32927 897 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 ATP1A2P50993 1020 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 WNT3AP56704 352 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 COPS2P61201 443 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 WASHC5Q12768 1159 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 XRCC4Q13426 336 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 TGIF1Q15583 401 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 PPP2R5EQ16537 467 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 DCAF12Q5T6F0 453 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 KAZNQ674X7 775 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 WASH2PQ6VEQ5 465 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 PID1Q7Z2X4 250 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 ARHGAP22Q7Z5H3 698 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 LRRTM4Q86VH4 590 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 ZFAND4Q86XD8 727 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 PLXDC1Q8IUK5 500 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 RBM12BQ8IXT5 1001 aaKnown RBP14.01□□□□□ -0.17
CAPN1-212ENST00000527887 ZMYND15Q9H091 742 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 WASH6PQ9NQA3 447 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 KLC4Q9NSK0 619 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 WDR70Q9NW82 654 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 PYCARDQ9ULZ3 195 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 EFR3BQ9Y2G0 817 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 HYOU1Q9Y4L1 999 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 PCDHA13Q9Y5I0 950 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 PCYT1BQ9Y5K3 369 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-212ENST00000527887 ARHGEF17Q96PE2 2063 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-212ENST00000527887 ZNF462Q96JM2 2506 aa14.01□□□□□ -0.17
CAPN1-212ENST00000527887 hCG_1818297A0A087WSY0 165 aa14□□□□□ -0.17
CAPN1-212ENST00000527887 ZSCAN12O43309 604 aa14□□□□□ -0.17
CAPN1-212ENST00000527887 SNX2O60749 519 aa14□□□□□ -0.17
CAPN1-212ENST00000527887 ZNF189O75820 626 aaPredicted RBP14□□□□□ -0.17
CAPN1-212ENST00000527887 CDK14O94921 469 aa14□□□□□ -0.17
CAPN1-212ENST00000527887 PIRTP0C851 137 aa14□□□□□ -0.17
CAPN1-212ENST00000527887 ZNF7P17097 686 aaPredicted RBP14□□□□□ -0.17
CAPN1-212ENST00000527887 VCLP18206 1134 aa14□□□□□ -0.17
CAPN1-212ENST00000527887 HLA-DPA1P20036 260 aa14□□□□□ -0.17
CAPN1-212ENST00000527887 CD68P34810 354 aaPredicted RBP14□□□□□ -0.17
CAPN1-212ENST00000527887 PPM1FP49593 454 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms