RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ZRANB3Q5FWF4 1079 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 AARS2Q5JTZ9 985 aaKnown RBP20.53■□□□□ 0.88
CD44-222ENST00000526025 CERS6Q6ZMG9 384 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 ALYREFQ86V81 257 aaKnown RBP20.53■□□□□ 0.88
CD44-222ENST00000526025 HID1Q8IV36 788 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 OR2I1PQ8NGU4 316 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 SCG3Q8WXD2 468 aaKnown RBP20.53■□□□□ 0.88
CD44-222ENST00000526025 CYP4F12Q9HCS2 524 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 ZDHHC3Q9NYG2 299 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 ATXN10Q9UBB4 475 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 DMGDHQ9UI17 866 aaKnown RBP20.53■□□□□ 0.88
CD44-222ENST00000526025 SUFUQ9UMX1 484 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 MAD1L1Q9Y6D9 718 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 TEX264Q9Y6I9 313 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 RPS6KL1Q9Y6S9 549 aa20.53■□□□□ 0.88
CD44-222ENST00000526025 C4orf47A7E2U8 309 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 GPR39O43194 453 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 GDF9O60383 454 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 POLBP06746 335 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 SDHBP21912 280 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 DGKAP23743 735 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 ARNTP27540 789 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 CA5AP35218 305 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 PPARGP37231 505 aaPredicted RBP20.52■□□□□ 0.88
CD44-222ENST00000526025 ARCN1P48444 511 aaKnown RBP20.52■□□□□ 0.88
CD44-222ENST00000526025 PLTPP55058 493 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 TUBB4BP68371 445 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 TMEM115Q12893 351 aaPredicted RBP20.52■□□□□ 0.88
CD44-222ENST00000526025 LRP8Q14114 963 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 PYCR3Q53H96 274 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 PRAMEF14Q5SWL7 426 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 DOK6Q6PKX4 331 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 ZDHHC24Q6UX98 284 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 CENPUQ71F23 418 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 GALNT13Q8IUC8 556 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 ZNF548Q8NEK5 533 aaPredicted RBP20.52■□□□□ 0.88
CD44-222ENST00000526025 OR6P1Q8NGX9 317 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 GDAP1Q8TB36 358 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 FBXO25Q8TCJ0 367 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 ZNF669Q96BR6 464 aaPredicted RBP20.52■□□□□ 0.88
CD44-222ENST00000526025 ZNF514Q96K75 400 aaPredicted RBP20.52■□□□□ 0.88
CD44-222ENST00000526025 TTC1Q99614 292 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 COPS8Q99627 209 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 LRRC61Q9BV99 259 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 OR2AG1Q9H205 316 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 CARS2Q9HA77 564 aaKnown RBP20.52■□□□□ 0.88
CD44-222ENST00000526025 MRPL40Q9NQ50 206 aaKnown RBP20.52■□□□□ 0.88
CD44-222ENST00000526025 TMEM98Q9Y2Y6 226 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 FAM169AQ9Y6X4 670 aa20.52■□□□□ 0.88
CD44-222ENST00000526025 ARHGEF17Q96PE2 2063 aaPredicted RBP20.52■□□□□ 0.87
CD44-222ENST00000526025 ZCWPW2A0A1B0GU75 182 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.51■□□□□ 0.87
CD44-222ENST00000526025 NEMP2A6NFY4 417 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 CFAP99D6REC4 459 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 FLRT2O43155 660 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 AQP9O43315 295 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 CDK14O94921 469 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 FUCA1P04066 466 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 RALBP11234 206 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 ZNF8P17098 575 aaPredicted RBP20.51■□□□□ 0.87
CD44-222ENST00000526025 POLD2P49005 469 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 GTF2H3Q13889 308 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 FRG1Q14331 258 aaKnown RBP20.51■□□□□ 0.87
CD44-222ENST00000526025 ELOCQ15369 112 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 KHDC1Q4VXA5 237 aaKnown RBP20.51■□□□□ 0.87
CD44-222ENST00000526025 FASTKD1Q53R41 847 aaKnown RBP20.51■□□□□ 0.87
CD44-222ENST00000526025 ZNF542PQ5EBM4 170 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 SPANXN3Q5MJ09 141 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 KCTD16Q68DU8 428 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 PSAPL1Q6NUJ1 521 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 LVRNQ6Q4G3 990 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 PACS1Q6VY07 963 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 SERPINA9Q86WD7 417 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 LMNTD2Q8IXW0 634 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 PIANPQ8IYJ0 282 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 RBFAQ8N0V3 343 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 GPR150Q8NGU9 434 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 FCRL3Q96P31 734 aaPredicted RBP20.51■□□□□ 0.87
CD44-222ENST00000526025 OR2M4Q96R27 311 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 EPB41L5Q9HCM4 733 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 CATSPERZQ9NTU4 200 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 ZDHHC18Q9NUE0 388 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 GPR34Q9UPC5 381 aa20.51■□□□□ 0.87
CD44-222ENST00000526025 ESYT3A0FGR9 886 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 KLHL33A6NCF5 533 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 LMO7DNF2Z398 122 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 TPP1O14773 563 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 SCAMP1O15126 338 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 VAPBO95292 243 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 CD59P13987 128 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 CTSEP14091 401 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 MSH3P20585 1137 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 BNIP3Q12983 259 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 CUL1Q13616 776 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 CRYMQ14894 314 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 PRRT3Q5FWE3 981 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 STEAP4Q687X5 459 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 CEP128Q6ZU80 1094 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.5■□□□□ 0.87
CD44-222ENST00000526025 GPBAR1Q8TDU6 330 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms