RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 RNF215Q9Y6U7 377 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 PIKFYVEQ9Y2I7 2098 aa20.64■□□□□ 0.89
TRAPPC9-215ENST00000524162 CHD6Q8TD26 2715 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 H7C0S8 307 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 CDK14O94921 469 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 ECEL1O95672 775 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 FGGP02679 453 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 ZNF140P52738 457 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 CLDN6P56747 220 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 TMEM115Q12893 351 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 CHST15Q7LFX5 561 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 LRRTM4Q86VH4 590 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 CCNJLQ8IV13 435 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 REXO1L1PQ8IX06 675 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 ZNF514Q96K75 400 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 PBKQ96KB5 322 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 GFM1Q96RP9 751 aaKnown RBP20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 LRRN3Q9H3W5 708 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 PAK5Q9P286 719 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 PCYT1BQ9Y5K3 369 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 ARL5AQ9Y689 179 aa20.63■□□□□ 0.89
TRAPPC9-215ENST00000524162 CELSR3Q9NYQ7 3312 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 KIR2DS5A0A0G2JLQ3 304 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 A0A0G2JNG1 304 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 A0A1W2PQM1 296 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 D6RAR5 112 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 KIR2DS3K7RE56 304 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 LDB2O43679 373 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 F3P13726 295 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 CCKBRP32239 447 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 LSSP48449 732 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 B4GALNT1Q00973 533 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 EIF3IQ13347 325 aaKnown RBP20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 SEMA5AQ13591 1074 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 LAMB3Q13751 1172 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 KIR2DS5Q14953 304 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 CHRNA6Q15825 494 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 WASH2PQ6VEQ5 465 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 MARCH9Q86YJ5 346 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 RASGEF1CQ8N431 466 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 OR4K2Q8NGD2 314 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 ZNF398Q8TD17 642 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 C1orf54Q8WWF1 131 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 LIN37Q96GY3 246 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 APOL2Q9BQE5 337 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 WASH6PQ9NQA3 447 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 PLEKHM1Q9Y4G2 1056 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 PCDHGA8Q9Y5G5 932 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 ENTPD2Q9Y5L3 495 aa20.62■□□□□ 0.89
TRAPPC9-215ENST00000524162 LAMA5O15230 3695 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 USP12O75317 370 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 SRP72O76094 671 aaKnown RBP20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 PRAMEF1O95521 474 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 CCL7P80098 99 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 XIAPP98170 497 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 DMPKQ09013 629 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 NFATC2Q13469 925 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 OLIG2Q13516 323 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 GPR33Q49SQ1 333 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 IYDQ6PHW0 289 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 FAM151BQ6UXP7 276 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 ZNF547Q8IVP9 402 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 CCDC89Q8N998 374 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 HEXDCQ8WVB3 486 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 TMEM159Q96B96 161 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 SH3KBP1Q96B97 665 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 TTC25Q96NG3 672 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 TMEM74Q96NL1 305 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 DPYSL5Q9BPU6 564 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 KCNF1Q9H3M0 494 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 SUDS3Q9H7L9 328 aaPredicted RBP20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 POLR1BQ9H9Y6 1135 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 SARS2Q9NP81 518 aaKnown RBP20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 RIMKLBQ9ULI2 386 aa20.61■□□□□ 0.89
TRAPPC9-215ENST00000524162 AHCTF1Q8WYP5 2266 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 MROH6A6NGR9 719 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 RHPN2P1A8MT19 583 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 CEP104O60308 925 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 IFNB1P01574 187 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 RPLP0P05388 317 aaKnown RBP20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 ACP5P13686 325 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 ZNF7P17097 686 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 VCLP18206 1134 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 PDX1P52945 283 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 MAZP56270 477 aaKnown RBP20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 CYP4F3Q08477 520 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 CDH17Q12864 832 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 GTF2H3Q13889 308 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 KHDC1Q4VXA5 237 aaKnown RBP20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 GPRC6AQ5T6X5 926 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 AGAP9Q5VTM2 703 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 C11orf96Q7Z7L8 435 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 SFTPA2Q8IWL1 248 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 STYXQ8WUJ0 223 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 PEX13Q92968 403 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 ULK4Q96C45 1275 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 NAP1L3Q99457 506 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 ETNK1Q9HBU6 452 aa20.6■□□□□ 0.89
TRAPPC9-215ENST00000524162 EIF2B3Q9NR50 452 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms