RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	ECI2	O75521	394 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	KRT34	O76011	436 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	KRT36	O76013	467 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	WISP3	O95389	354 aa	Predicted RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	MLYCD	O95822	493 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	PRSS56	P0CW18	603 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	CYP2A6	P11509	494 aa	Predicted RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	PABPC1	P11940	636 aa	Known RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	ENO3	P13929	434 aa	Predicted RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	POLR2E	P19388	210 aa	Known RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	PSMA3	P25788	255 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	HMGCL	P35914	325 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	VHL	P40337	213 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	BTK	Q06187	659 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	LCP2	Q13094	533 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	STX5	Q13190	355 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	ARHGEF7	Q14155	803 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	FASTK	Q14296	549 aa	Known RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	RPS6KA2	Q15349	733 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	TSN	Q15631	228 aa	Known RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	GPR33	Q49SQ1	333 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	LILRA6	Q6PI73	481 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	CPNE9	Q8IYJ1	553 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	CLYBL	Q8N0X4	340 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	TMEM151A	Q8N4L1	468 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	CPSF7	Q8N684	471 aa	Known RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	KDM1B	Q8NB78	822 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	SIDT2	Q8NBJ9	832 aa	Known RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	OR56A4	Q8NGH8	313 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	PHOSPHO2	Q8TCD6	241 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	ISG20	Q96AZ6	181 aa	Known RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	OTUB2	Q96DC9	234 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	ALG14	Q96F25	216 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	C19orf43	Q9BQ61	176 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	EFCAB1	Q9HAE3	211 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	TDP1	Q9NUW8	608 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	HCFC1R1	Q9NWW0	138 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	IL17C	Q9P0M4	197 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	HECA	Q9UBI9	543 aa	Predicted RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	TSR3	Q9UJK0	312 aa	Known RBP	10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	PLA2G4C	Q9UP65	541 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	ANGPTL3	Q9Y5C1	460 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	NOTCH4	Q99466	2003 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	BRWD1	Q9NSI6	2320 aa		10.68	□□□□□ -0.7
SPIDR-222	ENST00000524006	ZFC3H1	O60293	1989 aa	Known RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	NCF1B	A6NI72	391 aa	Predicted RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	NCF1C	A8MVU1	366 aa	Predicted RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	GFRA2	O00451	464 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	NVL	O15381	856 aa	Known RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	SMAD6	O43541	496 aa	Known RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	FZD6	O60353	706 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	GREM1	O60565	184 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	PDE5A	O76074	875 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	POP4	O95707	220 aa	Known RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	CD160	O95971	181 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	MT-CO1	P00395	513 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	RHO	P08100	348 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	SRC	P12931	536 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	NCF1	P14598	390 aa	Predicted RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	ITGAX	P20702	1163 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	CD9	P21926	228 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	RPS3	P23396	243 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	SP100	P23497	879 aa	Predicted RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	DGKA	P23743	735 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	HOXA9	P31269	272 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	PTPN5	P54829	565 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	INHBC	P55103	352 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	ADAR	P55265	1226 aa	Known RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	POLR2L	P62875	67 aa	Known RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	IRX1	P78414	480 aa	Predicted RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	SLC34A1	Q06495	639 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	CDC16	Q13042	620 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	PEX6	Q13608	980 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	FUT11	Q495W5	492 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	UNC50	Q53HI1	259 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	CARD16	Q5EG05	197 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	SWT1	Q5T5J6	900 aa	Known RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	TMEM207	Q6UWW9	146 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	LRRC74B	Q6ZQY2	392 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	SPRED2	Q7Z698	418 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	SERPINA9	Q86WD7	417 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	AHI1	Q8N157	1196 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	MRPL43	Q8N983	215 aa	Known RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	SP7	Q8TDD2	431 aa	Predicted RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	PIH1D2	Q8WWB5	315 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	RCN3	Q96D15	328 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	PANX3	Q96QZ0	392 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	ATOH8	Q96SQ7	321 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	EGFL8	Q99944	293 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	NUSAP1	Q9BXS6	441 aa	Known RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	OSBPL1A	Q9BXW6	950 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	SLC46A2	Q9BY10	475 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	LRRC3	Q9BY71	257 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	FAM126A	Q9BYI3	521 aa	Predicted RBP	10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	ZBTB26	Q9HCK0	441 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	RAD18	Q9NS91	495 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	RIC8B	Q9NVN3	520 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	PKD2L2	Q9NZM6	624 aa		10.67	□□□□□ -0.7
SPIDR-222	ENST00000524006	EPS15L1	Q9UBC2	864 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms