RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 LRRC66Q68CR7 880 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 SP5Q6BEB4 398 aaPredicted RBP9.18□□□□□ -0.94
PTPN12-216ENST00000523952 DNAJC24Q6P3W2 148 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 DCUN1D2Q6PH85 259 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 TRIM72Q6ZMU5 477 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 PRSS42Q7Z5A4 293 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 TMEM126BQ8IUX1 230 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 RBMXL3Q8N7X1 1067 aaKnown RBP9.18□□□□□ -0.94
PTPN12-216ENST00000523952 EPS8L1Q8TE68 723 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 SLC20A1Q8WUM9 679 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 SCAMP4Q969E2 229 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 ZNF599Q96NL3 588 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 FCRL4Q96PJ5 515 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 NUDCD1Q96RS6 583 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 RUFY1Q96T51 708 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 KCNK17Q96T54 332 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 RIOK2Q9BVS4 552 aaKnown RBP9.18□□□□□ -0.94
PTPN12-216ENST00000523952 NUDT9Q9BW91 350 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 UCK1Q9HA47 277 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 WASH6PQ9NQA3 447 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 KLC4Q9NSK0 619 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 SEPT11Q9NVA2 429 aaKnown RBP9.18□□□□□ -0.94
PTPN12-216ENST00000523952 TMEM63CQ9P1W3 806 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 RWDD2AQ9UIY3 292 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 AP4E1Q9UPM8 1137 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 ADGRG4Q8IZF6 3080 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 PDZD2O15018 2839 aa9.18□□□□□ -0.94
PTPN12-216ENST00000523952 SEC16AO15027 2179 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 HEATR9A2RTY3 570 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 LRRTM2O43300 516 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 GRID2O43424 1007 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 KIF1CO43896 1103 aaKnown RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 KLHL41O60662 606 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 DNAJC6O75061 913 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 CPNE3O75131 537 aaKnown RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 SCRG1O75711 98 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 GFPT2O94808 682 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 PGLSO95336 258 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 TIAF1O95411 115 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 SOD1P00441 154 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 PRF1P14222 555 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 NELFEP18615 380 aaKnown RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 XRCC1P18887 633 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 LPOP22079 712 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 CAPZBP47756 277 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 GLRBP48167 497 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 ZNF143P52747 638 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 CDR2Q01850 454 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 SLC10A7Q0GE19 358 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 TRAF2Q12933 501 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 SEPT7Q16181 437 aaKnown RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 TDRD12Q587J7 1177 aaKnown RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 PPP6R3Q5H9R7 873 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 HGSNATQ68CP4 663 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 PWWP2BQ6NUJ5 590 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 ARHGAP36Q6ZRI8 547 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 MED25Q71SY5 747 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 ZNF765Q7L2R6 523 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 TECPR1Q7Z6L1 1165 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 BPHLQ86WA6 291 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 TMEM102Q8N9M5 508 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 C3orf20Q8ND61 904 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 TM9SF4Q92544 642 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 CXorf40BQ96DE9 158 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 COX14Q96I36 57 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 MCEEQ96PE7 176 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 PLEKHG4BQ96PX9 1271 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 CNPY3Q9BT09 278 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 MLPHQ9BV36 600 aaPredicted RBP9.17□□□□□ -0.94
PTPN12-216ENST00000523952 VPS16Q9H269 839 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 NDST4Q9H3R1 872 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 NOD2Q9HC29 1040 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 GPATCH2LQ9NWQ4 482 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 OGFRQ9NZT2 677 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 C5AR2Q9P296 337 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 DNPEPQ9ULA0 475 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 B3GNT3Q9Y2A9 372 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 ZDHHC9Q9Y397 364 aa9.17□□□□□ -0.94
PTPN12-216ENST00000523952 PKDREJQ9NTG1 2253 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 A0A0U1RQS6 177 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 SIGLEC16A6NMB1 481 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 EIF3CLB5ME19 914 aaKnown RBP9.16□□□□□ -0.94
PTPN12-216ENST00000523952 F8VZ95 297 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 CEACAM4O75871 244 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 CYP1A1P04798 512 aaPredicted RBP9.16□□□□□ -0.94
PTPN12-216ENST00000523952 UCHL3P15374 230 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 ERCC2P18074 760 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 CA4P22748 312 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 VAV2P52735 878 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 GSDMDP57764 484 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 MAXP61244 160 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 UBE2IP63279 158 aaKnown RBP9.16□□□□□ -0.94
PTPN12-216ENST00000523952 PTPRRQ15256 657 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 PLA2G4EQ3MJ16 856 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 PLEKHN1Q494U1 663 aaPredicted RBP9.16□□□□□ -0.94
PTPN12-216ENST00000523952 VWA3BQ502W6 1294 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 RALGPS1Q5JS13 557 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 VWA5B1Q5TIE3 1220 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 KLHDC7AQ5VTJ3 777 aa9.16□□□□□ -0.94
PTPN12-216ENST00000523952 KLHL35Q6PF15 583 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms