RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 PIGHQ14442 188 aaPredicted RBP22.41■■□□□ 1.18
PVT1-218ENST00000523328 FAM71BQ8TC56 605 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 TRIM11Q96F44 468 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 ISCUQ9H1K1 167 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 OSGEPL1Q9H4B0 414 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 ARFGAP3Q9NP61 516 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 LMBRD1Q9NUN5 540 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 RBM22Q9NW64 420 aaKnown RBP eCLIP22.41■■□□□ 1.18
PVT1-218ENST00000523328 ZNF624Q9P2J8 865 aaPredicted RBP22.41■■□□□ 1.18
PVT1-218ENST00000523328 RCOR3Q9P2K3 495 aaPredicted RBP22.41■■□□□ 1.18
PVT1-218ENST00000523328 AMACRQ9UHK6 382 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 TTLL3Q9Y4R7 772 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 MYO9AB2RTY4 2548 aa22.41■■□□□ 1.18
PVT1-218ENST00000523328 RGSL1A5PLK6 1076 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 CREG1O75629 220 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 RECKO95980 971 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 CD48P09326 243 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 FGF5P12034 268 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 CA4P22748 312 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 PAFAH1B3Q15102 231 aaKnown RBP22.4■■□□□ 1.18
PVT1-218ENST00000523328 QPCTQ16769 361 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 ANKRD20A8PQ5CZ79 823 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 ZNF648Q5T619 568 aaPredicted RBP22.4■■□□□ 1.18
PVT1-218ENST00000523328 NCBP2-AS2Q69YL0 99 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 TIGD7Q6NT04 549 aaPredicted RBP22.4■■□□□ 1.18
PVT1-218ENST00000523328 RASGRP3Q8IV61 690 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 APLFQ8IW19 511 aaPredicted RBP22.4■■□□□ 1.18
PVT1-218ENST00000523328 NIPA2Q8N8Q9 360 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 FATE1Q969F0 183 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 EID2BQ96D98 161 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 ELMO2Q96JJ3 720 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 OR2AG1Q9H205 316 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 ANO10Q9NW15 660 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 PLEKHB1Q9UF11 243 aaPredicted RBP22.4■■□□□ 1.18
PVT1-218ENST00000523328 SLC23A2Q9UGH3 650 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 ESPL1Q14674 2120 aa22.4■■□□□ 1.18
PVT1-218ENST00000523328 MED13Q9UHV7 2174 aa22.39■■□□□ 1.18
PVT1-218ENST00000523328 KIF1CO43896 1103 aaKnown RBP22.39■■□□□ 1.17
PVT1-218ENST00000523328 SPAG6O75602 509 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 VIPP01282 170 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 HLA-DQB2P05538 268 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 AMD1P17707 334 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 CCNCP24863 283 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 KRT81Q14533 505 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 CAPRIN2Q6IMN6 1127 aaKnown RBP22.39■■□□□ 1.17
PVT1-218ENST00000523328 PRSS42Q7Z5A4 293 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 CCHCR1Q8TD31 782 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 RSC1A1Q92681 617 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 BTBD6Q96KE9 485 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 TSGA13Q96PP4 275 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 TWSG1Q9GZX9 223 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 DTLQ9NZJ0 730 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 LNPEPQ9UIQ6 1025 aa22.39■■□□□ 1.17
PVT1-218ENST00000523328 ANKRD66B4E2M5 251 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 CHUKO15111 745 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 VPS4BO75351 444 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 DNAJB5O75953 348 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 GNLYP22749 145 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 CAPZBP47756 277 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 ARSEP51690 589 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 KLHL30Q0D2K2 578 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 SEMA5AQ13591 1074 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 DNASE1L3Q13609 305 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 IFI16Q16666 785 aaKnown RBP22.38■■□□□ 1.17
PVT1-218ENST00000523328 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.38■■□□□ 1.17
PVT1-218ENST00000523328 CRTC3Q6UUV7 619 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 ADGRG6Q86SQ4 1221 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 LRRN4Q8WUT4 740 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 KLHL6Q8WZ60 621 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 MLPHQ9BV36 600 aaPredicted RBP22.38■■□□□ 1.17
PVT1-218ENST00000523328 TRIM55Q9BYV6 548 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 TRIM39Q9HCM9 518 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 LHX9Q9NQ69 397 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 RTN4Q9NQC3 1192 aaKnown RBP22.38■■□□□ 1.17
PVT1-218ENST00000523328 PADI1Q9ULC6 663 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 VPS4AQ9UN37 437 aa22.38■■□□□ 1.17
PVT1-218ENST00000523328 PIPSLA2A3N6 862 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 GPR89AB7ZAQ6 455 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 RASSF9O75901 435 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 AGFG2O95081 481 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 SLC25A14O95258 325 aaPredicted RBP22.37■■□□□ 1.17
PVT1-218ENST00000523328 TIAF1O95411 115 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 MMP2P08253 660 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 CCNYL3P0C7X3 344 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 GPR89BP0CG08 455 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 SKILP12757 684 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 STX1AQ16623 288 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 CCDC122Q5T0U0 273 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 SASS6Q6UVJ0 657 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 TRIM48Q8IWZ4 208 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 GALNT11Q8NCW6 608 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 CT55Q8WUE5 264 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 POT1Q9NUX5 634 aa22.37■■□□□ 1.17
PVT1-218ENST00000523328 TTLL8A6PVC2 850 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 MTA2O94776 668 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 BRAFP15056 766 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 DPYSL3Q14195 570 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 INSCQ1MX18 579 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 PLA2G4EQ3MJ16 856 aa22.36■■□□□ 1.17
PVT1-218ENST00000523328 TDRD12Q587J7 1177 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms