RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TRIM25Q14258 630 aaKnown RBP16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 TIGD2Q4W5G0 525 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 TTC27Q6P3X3 843 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 DEF8Q6ZN54 512 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 ARHGAP36Q6ZRI8 547 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 IRF2BP1Q8IU81 584 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 C2orf73Q8N5S3 287 aaPredicted RBP16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 SLC43A3Q8NBI5 491 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 ENKURQ8TC29 256 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 SLC44A1Q8WWI5 657 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 SIPA1Q96FS4 1042 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 ATG10Q9H0Y0 220 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 MATN4O95460 622 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 CFIP05156 583 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 C8GP07360 202 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 CCNFP41002 786 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 SPIBQ01892 262 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 LARS2Q15031 903 aaKnown RBP16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 RFX4Q33E94 735 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 TMEM164Q5U3C3 297 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 RPTNQ6XPR3 784 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 RTL4Q6ZR62 310 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 DHDDSQ86SQ9 333 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 TRABD2AQ86V40 505 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 IZUMO1Q8IYV9 350 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 ZNF567Q8N184 647 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 DAPK2Q9UIK4 370 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 IKZF3Q9UKT9 509 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 ELF3P78545 371 aaPredicted RBP16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 ECT2LQ008S8 904 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 NDUFAF6Q330K2 333 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 MPP5Q8N3R9 675 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 PAIP1Q9H074 479 aaKnown RBP16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 LRMDAQ9H2I8 198 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 TMEM27Q9HBJ8 222 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 PIGRP01833 764 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 CAPN1P07384 714 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 ATXN7L2Q5T6C5 722 aaPredicted RBP16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 HMGB4Q8WW32 186 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 PWWP2AQ96N64 755 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 DCUN1D5Q9BTE7 237 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 FAM192AQ9GZU8 254 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 DMAC2Q9NW81 257 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 PRPF19Q9UMS4 504 aaKnown RBP16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 LAMP2P13473 410 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 TAF1AQ15573 450 aaPredicted RBP16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 TAB1Q15750 504 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 SOWAHAQ2M3V2 549 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 ERICH5Q6P6B1 374 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 AVL9Q8NBF6 648 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 SDCBP2Q9H190 292 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 IPPKQ9H8X2 491 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 ARHGEF3Q9NR81 526 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 FZD10Q9ULW2 581 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 RPL26L1Q9UNX3 145 aaKnown RBP16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 SLC7A4O43246 635 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 PI15O43692 258 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 OGNP20774 298 aaKnown RBP16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 ZNF155Q12901 538 aaPredicted RBP16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 RASGEF1CQ8N431 466 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 NPLOC4Q8TAT6 608 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 NTAN1Q96AB6 310 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 ZNF599Q96NL3 588 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 NUAK2Q9H093 628 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 CLEC4MQ9H2X3 399 aaPredicted RBP16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 HCN3Q9P1Z3 774 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 ERGIC3Q9Y282 383 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 SNAP91O60641 907 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 IL6P05231 212 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 BPGMP07738 259 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 NDUFS1P28331 727 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 MAPK12P53778 367 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 FOXM1Q08050 763 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 C2orf80Q0P641 193 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 SULT1C3Q6IMI6 304 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 AMZ2Q86W34 360 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 SPATA22Q8NHS9 363 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 SLC22A18Q96BI1 424 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 HMGXB4Q9UGU5 601 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 ADH5P11766 374 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 CRHR1P34998 444 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 GHRHRQ02643 423 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 NRF1Q16656 503 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 ESRP1Q6NXG1 681 aaKnown RBP16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 PROSER1Q86XN7 944 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 RIT1Q92963 219 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 APOBEC3GQ9HC16 384 aaKnown RBP16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 EQTNQ9NQ60 294 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 SEC14L3Q9UDX4 400 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 MAGEL2Q9UJ55 1249 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 UBR1Q8IWV7 1749 aa16.12■□□□□ 0.17
PCDHA3-201ENST00000522353 A0A0U1RQJ8 604 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 RBM47A0AV96 593 aaKnown RBP16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 TGDSO95455 350 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 CCND3P30281 292 aaPredicted RBP16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 RCVRNP35243 200 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 SCNN1AP37088 669 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 ALKBH2Q6NS38 261 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 MZT2AQ6P582 158 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms