RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 SCO2O43819 266 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 SH3BP5O60239 455 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 AVPR1AP37288 418 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 DPP6P42658 865 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 HK2P52789 917 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 IRF9Q00978 393 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 GALK2Q01415 458 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 CREB5Q02930 508 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 PIK3R6Q5UE93 754 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 LRTOMTQ8WZ04 291 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 SNX19Q92543 992 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 HDAC11Q96DB2 347 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 RNF208Q9H0X6 261 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 CCSER2Q9H7U1 834 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 TMEM161AQ9NX61 479 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 STMN3Q9NZ72 180 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 SNAP91O60641 907 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 ATF4P18848 351 aaPredicted RBP13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 MPSTP25325 297 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 YWHAQP27348 245 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 HARS2P49590 506 aaKnown RBP13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 IKBKEQ14164 716 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 MTX3Q5HYI7 312 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 ARHGAP12Q8IWW6 846 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 ACVR1CQ8NER5 493 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 FLCNQ8NFG4 579 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 ABHD11Q8NFV4 315 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 MAGED4Q96JG8 741 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 MOV10Q9HCE1 1003 aaKnown RBP13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 SNX15Q9NRS6 342 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 SEPT3Q9UH03 358 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 B3GNT3Q9Y2A9 372 aa13.77□□□□□ -0.21
PCDHA2-202ENST00000520672 BPTFQ12830 3046 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 A8MV72 311 aaPredicted RBP13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 J3KR12 359 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 CCL22O00626 93 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 MAN1A2O60476 641 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 KRT8P05787 483 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 CTRB1P17538 263 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 TGM1P22735 817 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 CNTFP26441 200 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 STX1BP61266 288 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 NKX3-2P78367 333 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 TXNL4AP83876 142 aaKnown RBP13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 FAM205BPQ63HN1 556 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 CTRB2Q6GPI1 263 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 FUT10Q6P4F1 479 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 KCTD8Q6ZWB6 473 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 MON1AQ86VX9 555 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 OFCC1Q8IZS5 231 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 OR2T3Q8NH03 318 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 PPWD1Q96BP3 646 aaKnown RBP13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 SH3YL1Q96HL8 342 aaPredicted RBP13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 RPRD1AQ96P16 312 aaPredicted RBP13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 FSD1LQ9BXM9 530 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 TDRD1Q9BXT4 1180 aaKnown RBP13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 SMOC2Q9H3U7 446 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 NARFLQ9H6Q4 476 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 NT5MQ9NPB1 228 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 GJB3O75712 270 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 ARHGEF15O94989 841 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 SEMA3DO95025 777 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 OAZ2O95190 189 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 EEF1B2P24534 225 aaKnown RBP13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 SEPHS1P49903 392 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 AIF1P55008 147 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 OCA2Q04671 838 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 PRPSAP1Q14558 356 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 SPATA6LQ8N4H0 392 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 TP53INP1Q96A56 240 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 CCDC120Q96HB5 630 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 HHIPL1Q96JK4 782 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 DMRTB1Q96MA1 342 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 TMEM246Q9BRR3 403 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 FAM96AQ9H5X1 160 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 LRRC40Q9H9A6 602 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 PLSCR3Q9NRY6 295 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 MARCH2Q9P0N8 246 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 IPO11Q9UI26 975 aaKnown RBP13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 PCDHB12Q9Y5F1 795 aa13.76□□□□□ -0.21
PCDHA2-202ENST00000520672 RGSL1A5PLK6 1076 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 NCAM2O15394 837 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 DLGAP3O95886 979 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 HLA-DQB2P05538 268 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 ALOX5P09917 674 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 HAPLN1P10915 354 aaPredicted RBP13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 KCNQ1P51787 676 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 ART3Q13508 389 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 IGSF11Q5DX21 431 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 PIGGQ5H8A4 983 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 KIAA1841Q6NSI8 718 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 BCL7CQ8WUZ0 217 aaPredicted RBP13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 ZNF347Q96SE7 839 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 NPAS2Q99743 824 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 CATSPERBQ9H7T0 1116 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 ACTL7AQ9Y615 435 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 ZBBXA8MT70 800 aa13.75□□□□□ -0.21
PCDHA2-202ENST00000520672 CCNKO75909 580 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms