RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 KRT7P08729 469 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 KDELR1P24390 212 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 STAT5AP42229 794 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 SSR1P43307 286 aaKnown RBP11.63□□□□□ -0.55
POLB-208ENST00000520008 GFERP55789 205 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 SRSF1Q07955 248 aaKnown RBP eCLIP11.63□□□□□ -0.55
POLB-208ENST00000520008 ASTE1Q2TB18 679 aaPredicted RBP11.63□□□□□ -0.55
POLB-208ENST00000520008 ZNF648Q5T619 568 aaPredicted RBP11.63□□□□□ -0.55
POLB-208ENST00000520008 PDPK2PQ6A1A2 396 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 SLC9A4Q6AI14 798 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 CAVIN1Q6NZI2 390 aaKnown RBP11.63□□□□□ -0.55
POLB-208ENST00000520008 TMC3Q7Z5M5 1100 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 ADGRG6Q86SQ4 1221 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 LUZP1Q86V48 1076 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 VSIG1Q86XK7 387 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 UNC5BQ8IZJ1 945 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 TRAM1L1Q8N609 369 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 CCHCR1Q8TD31 782 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 STARD8Q92502 1023 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 RAPGEF5Q92565 580 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 IMP4Q96G21 291 aaKnown RBP11.63□□□□□ -0.55
POLB-208ENST00000520008 OLFM3Q96PB7 478 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 EFHD1Q9BUP0 239 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 PACSIN1Q9BY11 444 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 ADGRE3Q9BY15 652 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 BRD8Q9H0E9 1235 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 OR2AG1Q9H205 316 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 TRIT1Q9H3H1 467 aaKnown RBP11.63□□□□□ -0.55
POLB-208ENST00000520008 ZFYVE1Q9HBF4 777 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 CBX8Q9HC52 389 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 MAGEE1Q9HCI5 957 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 TRIM39Q9HCM9 518 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 ARFGAP3Q9NP61 516 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 ZNF624Q9P2J8 865 aaPredicted RBP11.63□□□□□ -0.55
POLB-208ENST00000520008 SLC23A2Q9UGH3 650 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 LCMT1Q9UIC8 334 aa11.63□□□□□ -0.55
POLB-208ENST00000520008 CLEC18AA5D8T8 446 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 GOLGA6L3A6NEY3 463 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 POLR1CO15160 346 aaPredicted RBP11.62□□□□□ -0.55
POLB-208ENST00000520008 TOX3O15405 576 aaPredicted RBP11.62□□□□□ -0.55
POLB-208ENST00000520008 SNX2O60749 519 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 BRAFP15056 766 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 F8A1P23610 371 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 CASRP41180 1078 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 SLC19A1P41440 591 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 NFKBIBQ15653 356 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 SLC14A2Q15849 920 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 SLC18A3Q16572 532 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 COLEC12Q5KU26 742 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 ZNF569Q5MCW4 686 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 FAM182AQ5T1J6 154 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 CLEC18BQ6UXF7 455 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 TMEM26Q6ZUK4 368 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 C11orf96Q7Z7L8 435 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 PTRH1Q86Y79 214 aaKnown RBP11.62□□□□□ -0.55
POLB-208ENST00000520008 PLXDC1Q8IUK5 500 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 ZNF547Q8IVP9 402 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 CLEC18CQ8NCF0 446 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 CCNYQ8ND76 341 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 CPLX3Q8WVH0 158 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 GLYATL1Q969I3 302 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 KIAA1143Q96AT1 154 aaPredicted RBP11.62□□□□□ -0.55
POLB-208ENST00000520008 C9orf72Q96LT7 481 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 TIMM29Q9BSF4 260 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 SPATA16Q9BXB7 569 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 ZNF768Q9H5H4 540 aaKnown RBP11.62□□□□□ -0.55
POLB-208ENST00000520008 KLC4Q9NSK0 619 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 CTTNBP2NLQ9P2B4 639 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 KLHL3Q9UH77 587 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 ANAPC2Q9UJX6 822 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 TMPRSS11EQ9UL52 423 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 LUC7L2Q9Y383 392 aaKnown RBP11.62□□□□□ -0.55
POLB-208ENST00000520008 ZNF711Q9Y462 761 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 SLC30A1Q9Y6M5 507 aa11.62□□□□□ -0.55
POLB-208ENST00000520008 MTA2O94776 668 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 SLC25A14O95258 325 aaPredicted RBP11.61□□□□□ -0.55
POLB-208ENST00000520008 H2AFZP0C0S5 128 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 PIRTP0C851 137 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 PRKAR1AP10644 381 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 ZNF28P17035 718 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 CASP14P31944 242 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 MAPK9P45984 424 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 CAPZBP47756 277 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 UBASH3AP57075 661 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 FOXK1P85037 733 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 SKIDA1Q1XH10 827 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 KHDC1Q4VXA5 237 aaKnown RBP11.61□□□□□ -0.55
POLB-208ENST00000520008 ATP1A1-AS1Q5TC04 95 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 ALS2CLQ60I27 953 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 ABRAXAS1Q6UWZ7 409 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 H2AFVQ71UI9 128 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 ESX1Q8N693 406 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 C9orf43Q8TAL5 461 aaPredicted RBP11.61□□□□□ -0.55
POLB-208ENST00000520008 CTNNBL1Q8WYA6 563 aaPredicted RBP11.61□□□□□ -0.55
POLB-208ENST00000520008 VPS35Q96QK1 796 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 CEP41Q9BYV8 373 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 POT1Q9NUX5 634 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 SHOC2Q9UQ13 582 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 LRRK2Q5S007 2527 aa11.61□□□□□ -0.55
POLB-208ENST00000520008 NBPF19A0A087WUL8 3843 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms