RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 PCDH12Q9NPG4 1184 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 WASH6PQ9NQA3 447 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 AGPAT3Q9NRZ7 376 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 ABI3Q9P2A4 366 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 TFIP11Q9UBB9 837 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 ZNF212Q9UDV6 495 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 HS3ST4Q9Y661 456 aa6.65□□□□□ -1.34
CTNNA1-216ENST00000519489 HCFC1P51610 2035 aa6.65□□□□□ -1.35
CTNNA1-216ENST00000519489 FAM237BA0A1B0GVD1 139 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 A0A1W2PPR1 153 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 TGFBR3LH3BV60 316 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 KIAA0391O15091 583 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 EIF3DO15371 548 aaKnown RBP eCLIP6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PRAMEF2O60811 474 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 CPNE3O75131 537 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 CLSTN1O94985 981 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 REC8O95072 547 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 IFNA2P01563 188 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 HLA-DRAP01903 254 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PSMA5P28066 241 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 ARCN1P48444 511 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 NUCB2P80303 420 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 NRG1Q02297 640 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 RALGDSQ12967 914 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 SYCP1Q15431 976 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 SGSM1Q2NKQ1 1148 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PTCHD3Q3KNS1 767 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 FOXD4L6Q3SYB3 417 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 C5orf22Q49AR2 442 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 ZFYVE27Q5T4F4 411 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 C10orf62Q5T681 223 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PNCKQ6P2M8 343 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 FOXD4L3Q6VB84 417 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 GDPD4Q6W3E5 623 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 LEKR1Q6ZMV7 388 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 LINC00696Q6ZRV3 163 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 FAM92BQ6ZTR7 304 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 C8orf86Q6ZUL3 223 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PRSS42Q7Z5A4 293 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 C11orf96Q7Z7L8 435 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PLXDC1Q8IUK5 500 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 CPSF7Q8N684 471 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 KIAA0895Q8NCT3 520 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PARD3BQ8TEW8 1205 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PHF10Q8WUB8 498 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 RSC1A1Q92681 617 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 ARHGEF26Q96DR7 871 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 SERPINB11Q96P15 392 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 FCRL4Q96PJ5 515 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 ZSWIM1Q9BR11 485 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 MESP1Q9BRJ9 268 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 RNF32Q9H0A6 362 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PLEKHF2Q9H8W4 249 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 CNGB3Q9NQW8 809 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 OLFML3Q9NRN5 406 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PCMTD2Q9NV79 361 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 PLA2G3Q9NZ20 509 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 SEMA5BQ9P283 1151 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 TBC1D29Q9UFV1 150 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 TSPAN16Q9UKR8 245 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 RARRES3Q9UL19 164 aa6.64□□□□□ -1.35
CTNNA1-216ENST00000519489 ANKRD36A6QL64 1941 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 TOX3O15405 576 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 DDX3YO15523 660 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 LDB2O43679 373 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 KLK8O60259 260 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 CLDN11O75508 207 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 SCRG1O75711 98 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 RASSF9O75901 435 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 LCA5LO95447 670 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 ADCY5O95622 1261 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 UMODP07911 640 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 RHOCP08134 193 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 BRAFP15056 766 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 KELP23276 732 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 MMP12P39900 470 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 EPHB1P54762 984 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 DCAF7P61962 342 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 ABRQ12979 859 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 KEAP1Q14145 624 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 NCF4Q15080 339 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 GPR19Q15760 415 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 ME3Q16798 604 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 NKAPLQ5M9Q1 402 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 RABGAP1LQ5R372 815 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 TTC39BQ5VTQ0 682 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 CACHD1Q5VU97 1274 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 IYDQ6PHW0 289 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 RAB43Q86YS6 212 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 HIPK1Q86Z02 1210 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 SIX6OS1Q8N1H7 587 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 RYBPQ8N488 228 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 RPRMLQ8N4K4 120 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 AMER2Q8N7J2 671 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 LILRB4Q8NHJ6 448 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 ROBO4Q8WZ75 1007 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 ZNF501Q96CX3 271 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 HMCESQ96FZ2 354 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 CALML4Q96GE6 196 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms