RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 KCNV2Q8TDN2 545 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 SREK1Q8WXA9 508 aaKnown RBP14.37□□□□□ -0.11
CLN8-204ENST00000519254 SKA1Q96BD8 255 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 SLC6A17Q9H1V8 727 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 DKK3Q9UBP4 350 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 ITM2BQ9Y287 266 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 PLXNB3Q9ULL4 1909 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 PIKFYVEQ9Y2I7 2098 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 CKAP5Q14008 2032 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 UBA6A0AVT1 1052 aaPredicted RBP14.37□□□□□ -0.11
CLN8-204ENST00000519254 GAPDHSO14556 408 aaPredicted RBP14.37□□□□□ -0.11
CLN8-204ENST00000519254 MID1O15344 667 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 DNAJC8O75937 253 aaPredicted RBP14.37□□□□□ -0.11
CLN8-204ENST00000519254 LHCGRP22888 699 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 SERPINB3P29508 390 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 FMO4P31512 558 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 PRKAA2P54646 552 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 PRKCQQ04759 706 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 ACAP2Q15057 778 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 CST6Q15828 149 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 ZRANB3Q5FWF4 1079 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 FAM46CQ5VWP2 391 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 CLNKQ7Z7G1 428 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 FLCNQ8NFG4 579 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 PPP4R1Q8TF05 950 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 PBXIP1Q96AQ6 731 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 SGF29Q96ES7 293 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 BIRC8Q96P09 236 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 ASB2Q96Q27 587 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 MCCC1Q96RQ3 725 aaPredicted RBP14.37□□□□□ -0.11
CLN8-204ENST00000519254 RSPH9Q9H1X1 276 aaPredicted RBP14.37□□□□□ -0.11
CLN8-204ENST00000519254 POPDC3Q9HBV1 291 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 ACSS2Q9NR19 701 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 WNT16Q9UBV4 365 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 ZFP69BQ9UJL9 534 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 PPIL1Q9Y3C6 166 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 CAPN7Q9Y6W3 813 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 COL6A3P12111 3177 aa14.37□□□□□ -0.11
CLN8-204ENST00000519254 ANKRD12Q6UB98 2062 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 A0A1W2PQF6 199 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 ZNF195O14628 629 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 GPR39O43194 453 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 OR1I1O60431 355 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 CYP2A6P11509 494 aaPredicted RBP14.36□□□□□ -0.11
CLN8-204ENST00000519254 ADRB3P13945 408 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 NFKBIAP25963 317 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 TARSP26639 723 aaKnown RBP14.36□□□□□ -0.11
CLN8-204ENST00000519254 MAGEA9P43362 315 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 KCNC1P48547 511 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 TTPAP49638 278 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 NAGLUP54802 743 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 ARHGEF7Q14155 803 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 SPDYAQ5MJ70 313 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 ZNF776Q68DI1 518 aaPredicted RBP14.36□□□□□ -0.11
CLN8-204ENST00000519254 ERAP2Q6P179 960 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 KLC3Q6P597 504 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 MAVSQ7Z434 540 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 C10orf67Q8IYJ2 551 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 OR2T3Q8NH03 318 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 HCAR2Q8TDS4 363 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 PRR11Q96HE9 360 aaPredicted RBP14.36□□□□□ -0.11
CLN8-204ENST00000519254 LYSMD1Q96S90 227 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 C19orf43Q9BQ61 176 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 SIKE1Q9BRV8 207 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 FOXQ1Q9C009 403 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 MKRN2Q9H000 416 aaKnown RBP14.36□□□□□ -0.11
CLN8-204ENST00000519254 DRC3Q9H069 523 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 MUTYHQ9UIF7 546 aa14.36□□□□□ -0.11
CLN8-204ENST00000519254 NEMP2A6NFY4 417 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 STK25O00506 426 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 SRP72O76094 671 aaKnown RBP14.35□□□□□ -0.11
CLN8-204ENST00000519254 HSPA4LO95757 839 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 RBP1P09455 135 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 T-ENOLP0DO92 83 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 ALOX15P16050 662 aaPredicted RBP14.35□□□□□ -0.11
CLN8-204ENST00000519254 ZNF37AP17032 561 aaPredicted RBP14.35□□□□□ -0.11
CLN8-204ENST00000519254 ATP5F1P24539 256 aaPredicted RBP14.35□□□□□ -0.11
CLN8-204ENST00000519254 VIPR1P32241 457 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 CCR10P46092 362 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 COPAP53621 1224 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 CACNG1Q06432 222 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 CNTN1Q12860 1018 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 EOGTQ5NDL2 527 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 ERN2Q76MJ5 926 aaKnown RBP14.35□□□□□ -0.11
CLN8-204ENST00000519254 ISCA2Q86U28 154 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 ALYREFQ86V81 257 aaKnown RBP14.35□□□□□ -0.11
CLN8-204ENST00000519254 WDR75Q8IWA0 830 aaKnown RBP14.35□□□□□ -0.11
CLN8-204ENST00000519254 GANCQ8TET4 914 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 FAM136AQ96C01 138 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 EBF4Q9BQW3 602 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 WRAP53Q9BUR4 548 aaKnown RBP14.35□□□□□ -0.11
CLN8-204ENST00000519254 LMAN1LQ9HAT1 526 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 VPS9D1Q9Y2B5 631 aa14.35□□□□□ -0.11
CLN8-204ENST00000519254 MRPS17Q9Y2R5 130 aaKnown RBP14.35□□□□□ -0.11
CLN8-204ENST00000519254 NEMP1O14524 444 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 ZBTB14O43829 449 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 RHOBTB1O94844 696 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 ADH1BP00325 375 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 CHRNGP07510 517 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 CHRNB1P11230 501 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms