RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 LDB2O43679 373 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 CEP104O60308 925 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 BRINP1O60477 761 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 SNX2O60749 519 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 IFNB1P01574 187 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 FGGP02679 453 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 LPOP22079 712 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-219ENST00000518824 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-219ENST00000518824 CDKN1CP49918 316 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-219ENST00000518824 ZNF140P52738 457 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-219ENST00000518824 TMEM115Q12893 351 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-219ENST00000518824 PEX6Q13608 980 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 RTP5Q14D33 572 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 NKAIN2Q5VXU1 208 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 RBM44Q6ZP01 1051 aaKnown RBP13.14□□□□□ -0.31
VEGFA-219ENST00000518824 SPRED1Q7Z699 444 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 C11orf96Q7Z7L8 435 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 PHYKPLQ8IUZ5 450 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 RASGEF1AQ8N9B8 481 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 TRIM58Q8NG06 486 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 BRSK1Q8TDC3 778 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 PRR11Q96HE9 360 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-219ENST00000518824 MS4A14Q96JA4 679 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 DEPDC7Q96QD5 511 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 VPS35Q96QK1 796 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 FAM96AQ9H5X1 160 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 ARNT2Q9HBZ2 717 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 PRDM8Q9NQV8 689 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 RAD18Q9NS91 495 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 KLC4Q9NSK0 619 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 TRMT1Q9NXH9 659 aaKnown RBP13.14□□□□□ -0.31
VEGFA-219ENST00000518824 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.14□□□□□ -0.311e-9■□□□□ 10.2
VEGFA-219ENST00000518824 APPL1Q9UKG1 709 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 ZNF148Q9UQR1 794 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 AK5Q9Y6K8 562 aa13.14□□□□□ -0.31
VEGFA-219ENST00000518824 CACNA1BQ00975 2339 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 PRR19A6NJB7 356 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 USP27XA6NNY8 438 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 D6RAR5 112 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 NUDT21O43809 227 aaKnown RBP13.13□□□□□ -0.31
VEGFA-219ENST00000518824 CDK14O94921 469 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 AP2A1O95782 977 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 ALDH4A1P30038 563 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 RPL22P35268 128 aaKnown RBP13.13□□□□□ -0.31
VEGFA-219ENST00000518824 CFHR1Q03591 330 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 SPIDRQ14159 915 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 P3H1Q32P28 736 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 AMZ1Q400G9 498 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 C3orf38Q5JPI3 329 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 GPRC6AQ5T6X5 926 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 USP53Q70EK8 1073 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 ZNF438Q7Z4V0 828 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 SLC35F6Q8N357 371 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 OR52K1Q8NGK4 314 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 GDAP1Q8TB36 358 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 ZNF398Q8TD17 642 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 NXPE2Q96DL1 559 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 PDLIM2Q96JY6 352 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 DNAJC1Q96KC8 554 aaKnown RBP13.13□□□□□ -0.31
VEGFA-219ENST00000518824 GFM1Q96RP9 751 aaKnown RBP13.13□□□□□ -0.31
VEGFA-219ENST00000518824 NRSN2Q9GZP1 204 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 RMI1Q9H9A7 625 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 RDH14Q9HBH5 336 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 DKK4Q9UBT3 224 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 RALYQ9UKM9 306 aaKnown RBP13.13□□□□□ -0.31
VEGFA-219ENST00000518824 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 DNAJC16Q9Y2G8 782 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 PKP3Q9Y446 797 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 BPTFQ12830 3046 aa13.13□□□□□ -0.31
VEGFA-219ENST00000518824 ZZEF1O43149 2961 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 CELSR3Q9NYQ7 3312 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 SGTAO43765 313 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 SRP72O76094 671 aaKnown RBP13.12□□□□□ -0.31
VEGFA-219ENST00000518824 PRAMEF1O95521 474 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 HGFP14210 728 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 HOXB3P14651 431 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-219ENST00000518824 ZNF7P17097 686 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-219ENST00000518824 CSF2RBP32927 897 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 ARSDP51689 593 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 GABREP78334 506 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 LRP8Q14114 963 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 POU6F1Q14863 301 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 SEPT7Q16181 437 aaKnown RBP13.12□□□□□ -0.31
VEGFA-219ENST00000518824 CCNG2Q16589 344 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 CCDC38Q502W7 563 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 IYDQ6PHW0 289 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 XKR5Q6UX68 686 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 ZNF574Q6ZN55 896 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-219ENST00000518824 DET1Q7L5Y6 550 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 LRRTM4Q86VH4 590 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 SFRP1Q8N474 314 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 BEND7Q8N7W2 519 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-219ENST00000518824 PRELID2Q8N945 189 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 NUDT22Q9BRQ3 303 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 SEMA6CQ9H3T2 930 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 ASB8Q9H765 288 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 LRRC40Q9H9A6 602 aa13.12□□□□□ -0.31
VEGFA-219ENST00000518824 TMEM9Q9P0T7 183 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms