RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 RPS3P23396 243 aaKnown RBP eCLIP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 MZF1P28698 734 aaPredicted RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PCSK6P29122 969 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PTPN6P29350 595 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SLC7A1P30825 629 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CORO1AP31146 461 aaKnown RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SLC5A2P31639 672 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 RFC2P35250 354 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PEX19P40855 299 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 NRIP1P48552 1158 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 HSPA13P48723 471 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 GSK3BP49841 420 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CLCN4P51793 760 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ATXN3P54252 364 aaPredicted RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 DIO3P55073 304 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CDH13P55290 713 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ERVPABLB-1P60509 514 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ERVK-8P63133 956 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PRAMEP78395 509 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CLCQ05315 142 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SMARCB1Q12824 385 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 TRAP1Q12931 704 aaKnown RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 BNIP2Q12982 314 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 DUSP4Q13115 394 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 LSAMPQ13449 338 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SELPLGQ14242 412 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 TRIM25Q14258 630 aaKnown RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ZNF235Q14590 738 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PCBP2Q15366 365 aaKnown RBP eCLIP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 MAPRE2Q15555 327 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ATP6AP1Q15904 470 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 GPR162Q16538 588 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 NKG7Q16617 165 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PHKG1Q16816 387 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 LRRC36Q1X8D7 754 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ZXDCQ2QGD7 858 aaPredicted RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 MYLK3Q32MK0 819 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 C18orf21Q32NC0 220 aaPredicted RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 GRAMD1BQ3KR37 738 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PLA2G4EQ3MJ16 856 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PABPC1LQ4VXU2 614 aaKnown RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 AGKQ53H12 422 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 FBXO48Q5FWF7 155 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 RABL3Q5HYI8 236 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 NHSL2Q5HYW2 709 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PAGE3Q5JUK9 113 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SAMD4BQ5PRF9 694 aaKnown RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 C6orf52Q5T4I8 152 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ACBD5Q5T8D3 534 aaPredicted RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 THEMIS2Q5TEJ8 643 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 BLOC1S3Q6QNY0 202 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 XKR5Q6UX68 686 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ISLR2Q6UXK2 745 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 DLEU7Q6UYE1 221 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 TPGS1Q6ZTW0 290 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 USP51Q70EK9 711 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 LYSMD3Q7Z3D4 306 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 GLT6D1Q7Z4J2 308 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SPRED1Q7Z699 444 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 AMIGO2Q86SJ2 522 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SATL1Q86VE3 508 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 AQP12AQ8IXF9 295 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 MSRB3Q8IXL7 192 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CPNE9Q8IYJ1 553 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CFAP52Q8N1V2 620 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 LRRC43Q8N309 656 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 C10orf111Q8N326 155 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SFRP1Q8N474 314 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 MINDY1Q8N5J2 469 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 DPP10Q8N608 796 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PCDH20Q8N6Y1 951 aaKnown RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 FAM86B1Q8N7N1 296 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 GOLM1Q8NBJ4 401 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SIDT2Q8NBJ9 832 aaKnown RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PCSK9Q8NBP7 692 aaKnown RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PPFIBP2Q8ND30 876 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CATSPER1Q8NEC5 780 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ZNF548Q8NEK5 533 aaPredicted RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PDZD8Q8NEN9 1154 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 LPCAT1Q8NF37 534 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 DBF4BQ8NFT6 615 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SPDYE1Q8NFV5 336 aaPredicted RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 OR4K2Q8NGD2 314 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 OR52B6Q8NGF0 335 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 OR2T34Q8NGX1 318 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 OR2T3Q8NH03 318 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 OR4L1Q8NH43 312 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 CD99L2Q8TCZ2 262 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 BLOC1S5Q8TDH9 187 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 BPIFB1Q8TDL5 484 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 TSPEARQ8WU66 669 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 PIH1D2Q8WWB5 315 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 SREK1Q8WXA9 508 aaKnown RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 LRTOMTQ8WZ04 291 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 KCNJ9Q92806 393 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 EXT2Q93063 718 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ZUFSPQ96AP4 578 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ZNF689Q96CS4 500 aaPredicted RBP3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 ECHDC3Q96DC8 303 aa3.22□□□□□ -1.89
SCARNA20.6-201ENST00000517251 LINGO1Q96FE5 620 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms