RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 MCCP23508 829 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CNTFP26441 200 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 MAP2K2P36507 400 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 APOBEC1P41238 236 aaKnown RBP2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PRCPP42785 496 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CCT5P48643 541 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 IRX6P78412 446 aaPredicted RBP2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 BAK1Q16611 211 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KRTCAP3Q53RY4 240 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 FAM53AQ6NSI3 398 aaPredicted RBP2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 FAAP20Q6NZ36 180 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PAPD4Q6PIY7 484 aaKnown RBP2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TSSK4Q6SA08 328 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PACS1Q6VY07 963 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NOTCH2NLQ7Z3S9 236 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 OR14L1PQ8NHC6 308 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 IGSF8Q969P0 613 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 RRNAD1Q96FB5 475 aaKnown RBP2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 DCTN5Q9BTE1 182 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TRIM15Q9C019 465 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 WDR13Q9H1Z4 485 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PPCSQ9HAB8 311 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 BRF2Q9HAW0 419 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SLC38A7Q9NVC3 462 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 STK39Q9UEW8 545 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CAMK2AQ9UQM7 478 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 MRPS28Q9Y2Q9 187 aaKnown RBP2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 MAU2Q9Y6X3 613 aa2.62□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PRAG1Q86YV5 1406 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 A0A0G2JNG1 304 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 EIF4E1BA6NMX2 242 aaKnown RBP2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 IFNL4K9M1U5 179 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PIP5K1CO60331 668 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TFAP2AP05549 437 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CD48P09326 243 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 XBP1P17861 261 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SP100P23497 879 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ELF1P32519 619 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PIP4K2AP48426 406 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CLK1P49759 484 aaKnown RBP2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 MBTD1Q05BQ5 628 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CDC16Q13042 620 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TBX2Q13207 712 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KIR2DS5Q14953 304 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 DUOXA1Q1HG43 343 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KIAA1644Q3SXP7 199 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TCTE1Q5JU00 501 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SH2D5Q6ZV89 423 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 GBGT1Q8N5D6 347 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SMARCE1Q969G3 411 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZNF653Q96CK0 615 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PRMT6Q96LA8 375 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 UBXN10Q96LJ8 280 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SEMA3CQ99985 751 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ERVMER34-1Q9H9K5 563 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 FGF22Q9HCT0 170 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 C2orf42Q9NWW7 574 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 DLGAP2Q9P1A6 1054 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 UBA2Q9UBT2 640 aaPredicted RBP2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ACAD8Q9UKU7 415 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KCNJ14Q9UNX9 436 aa2.61□□□□□ -1.99
RNU6-1088P-201ENST00000516850 A0A1W2PQM1 296 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TMEM178BH3BS89 294 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 LDLRAD4O15165 306 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CRLF1O75462 422 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZNF821O75541 412 aaPredicted RBP2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 JRKO75564 520 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NKX2-2O95096 273 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 POLBP06746 335 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 MSH3P20585 1137 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 RARSP54136 660 aaKnown RBP2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KRTAP10-3P60369 221 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TMEM187Q14656 261 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 LPAL2Q16609 132 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ALG11Q2TAA5 492 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ALS2CLQ60I27 953 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 CDC73Q6P1J9 531 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PLXDC2Q6UX71 529 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ANO5Q75V66 913 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 EMC1Q8N766 993 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 OR1J2Q8NGS2 313 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 NFKBIDQ8NI38 313 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZNF473Q8WTR7 871 aaKnown RBP2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PSPC1Q8WXF1 523 aaKnown RBP2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ZNF689Q96CS4 500 aaPredicted RBP2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 RNF125Q96EQ8 232 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SMC6Q96SB8 1091 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 ATOH8Q96SQ7 321 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 PSD2Q9BQI7 771 aa2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 APOBEC3GQ9HC16 384 aaKnown RBP2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 INTS6Q9UL03 887 aaKnown RBP2.6□□□□□ -1.99
RNU6-1088P-201ENST00000516850 KANSL1LA0AUZ9 987 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 C1orf226A1L170 272 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 H7C423 109 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 TCERG1O14776 1098 aaKnown RBP2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 SORBS2O94875 1100 aaKnown RBP2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 BMP10O95393 424 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 HMBSP08397 361 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 IGHV4-38-2P0DP08 117 aa2.59□□□□□ -1.99
RNU6-1088P-201ENST00000516850 DPEP1P16444 411 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms