RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ZNF672Q499Z4 452 aaPredicted RBP3.21□□□□□ -1.9
HERC4-215ENST00000515753 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 CCNI2Q6ZMN8 369 aaPredicted RBP3.21□□□□□ -1.9
HERC4-215ENST00000515753 SLC46A3Q7Z3Q1 461 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 ZSCAN30Q86W11 494 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 GALNT13Q8IUC8 556 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 FOXRED2Q8IWF2 684 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 CHERPQ8IWX8 916 aaKnown RBP3.21□□□□□ -1.9
HERC4-215ENST00000515753 TEX11Q8IYF3 940 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 SPATA22Q8NHS9 363 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 HUS1BQ8NHY5 278 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 LNX1Q8TBB1 728 aaPredicted RBP3.21□□□□□ -1.9
HERC4-215ENST00000515753 NEK9Q8TD19 979 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 KCNG4Q8TDN1 519 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 POMGNT1Q8WZA1 660 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 JAKMIP2Q96AA8 810 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 IL17FQ96PD4 163 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 HEMGNQ9BXL5 484 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 NUF2Q9BZD4 464 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 OR10A4Q9H209 315 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 RABEP2Q9H5N1 569 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 BPIFA1Q9NP55 256 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 TSPOAP1O95153 1857 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 MLH3Q9UHC1 1453 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 ADAMTSL3P82987 1691 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 SPAG9O60271 1321 aaKnown RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 TROQ12816 1431 aaPredicted RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 TULP2O00295 520 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 CLDN14O95500 239 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 SPARCP09486 303 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 CLTBP09497 229 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 SCG2P13521 617 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 NFKBIAP25963 317 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 HADHAP40939 763 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 EIF2DP41214 584 aaKnown RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 METAP2P50579 478 aaKnown RBP eCLIP3.2□□□□□ -1.9
HERC4-215ENST00000515753 DLX5P56178 289 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 TROAPQ12815 778 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 ZNF155Q12901 538 aaPredicted RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 LRMPQ12912 555 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 PRPF4BQ13523 1007 aaKnown RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 CRYMQ14894 314 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 PPP2R5BQ15173 497 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 SF3B4Q15427 424 aaKnown RBP eCLIP3.2□□□□□ -1.9
HERC4-215ENST00000515753 GSTA3Q16772 222 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 TMEM266Q2M3C6 531 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 CCDC92Q53HC0 331 aaPredicted RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 SLC10A5Q5PT55 438 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 C6orf141Q5SZD1 244 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 METTL2BQ6P1Q9 378 aaKnown RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 TMEM154Q6P9G4 183 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 NCEH1Q6PIU2 408 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 LCTLQ6UWM7 567 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 QSOX2Q6ZRP7 698 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 GALNTL5Q7Z4T8 443 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 SNX32Q86XE0 403 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 WDR63Q8IWG1 891 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 MUC20Q8N307 709 aaPredicted RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 CHCHD4Q8N4Q1 142 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 ZCCHC9Q8N567 271 aaKnown RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 ZBTB2Q8N680 514 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 KIF1BPQ96EK5 621 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 CCDC34Q96HJ3 373 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 METTL2AQ96IZ6 378 aaKnown RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 ZNF570Q96NI8 536 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 NODALQ96S42 347 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 STRA6Q9BX79 667 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 MAK16Q9BXY0 300 aaKnown RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 ERVMER34-1Q9H9K5 563 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 MMP25Q9NPA2 562 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 LTB4R2Q9NPC1 389 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 NOX4Q9NPH5 578 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 TCF7L2Q9NQB0 619 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 CCDC177Q9NQR7 707 aaPredicted RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 CNGB3Q9NQW8 809 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 ASAH2Q9NR71 780 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 EHD2Q9NZN4 543 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 CTNNAL1Q9UBT7 734 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 LIMA1Q9UHB6 759 aaKnown RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 TINAGQ9UJW2 476 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 ACAD8Q9UKU7 415 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 LSM4Q9Y4Z0 139 aaKnown RBP3.2□□□□□ -1.9
HERC4-215ENST00000515753 CFAP74Q9C0B2 1584 aa3.2□□□□□ -1.9
HERC4-215ENST00000515753 ARHGEF40Q8TER5 1519 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 RAPGEF6Q8TEU7 1601 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 IGHV4OR15-8A0A075B7B6 117 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 SAA2-SAA4A0A096LPE2 208 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 A0A1W2PRG0 241 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 hDV102S1A0JD36 115 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 LIPT2A6NK58 231 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 AKR1B15C9JRZ8 316 aaPredicted RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 UBE2CO00762 179 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 SH2B2O14492 632 aaPredicted RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 SOCS6O14544 535 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 MID1O15344 667 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 SEC14L5O43304 696 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 KDM4BO94953 1096 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 FTCDO95954 541 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 IGLV2-11P01706 119 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 F7P08709 466 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms