RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CYHR1Q6ZMK1 362 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 AMER2Q8N7J2 671 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 AMBRA1Q9C0C7 1298 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 NXF2Q9GZY0 626 aaKnown RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 DUSP21Q9H596 190 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 SLC52A3Q9NQ40 469 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 IGSF5Q9NSI5 407 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 FAM49BQ9NUQ9 324 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 SIX4Q9UIU6 781 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 LEF1Q9UJU2 399 aaPredicted RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 MFHAS1Q9Y4C4 1052 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 SSC5DA1L4H1 1573 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 XIRP1Q702N8 1843 aaKnown RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 LY75O60449 1722 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 FAM92AA1XBS5 289 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 EFCAB9A8MZ26 197 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 LOC110117498-PIK3R3F6TDL0 507 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 EEF2KO00418 725 aaKnown RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 HUS1O60921 280 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 USP12O75317 370 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 YES1P07947 543 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 LTA4HP09960 611 aaKnown RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 ARSAP15289 507 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 HOXB6P17509 224 aaKnown RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 AGXTP21549 392 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 HRH2P25021 359 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 PTPN3P26045 913 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 RGS7P49802 495 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 B2MP61769 119 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 EMX2Q04743 252 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 KCNAB2Q13303 367 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 CDK5R2Q13319 367 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 ACAP2Q15057 778 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 GLYATQ6IB77 296 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 SPATA19Q7Z5L4 167 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 SLC38A6Q8IZM9 456 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 PIK3R3Q92569 461 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 RIPOR3Q96MK2 946 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 COQ7Q99807 217 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 NT5C1AQ9BXI3 368 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 GON7Q9BXV9 100 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 LRRC3Q9BY71 257 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 MKRN2Q9H000 416 aaKnown RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 DCSTAMPQ9H295 470 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 GIMAP4Q9NUV9 329 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 RAPGEFL1Q9UHV5 662 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 FZD10Q9ULW2 581 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 PCDHGA10Q9Y5H3 936 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 ORC6Q9Y5N6 252 aa12.73□□□□□ -0.37
SMAD1-215ENST00000515385 MAFBQ9Y5Q3 323 aaPredicted RBP12.73□□□□□ -0.37
SMAD1-215ENST00000515385 POLR1CO15160 346 aaPredicted RBP12.72□□□□□ -0.37
SMAD1-215ENST00000515385 AXIN1O15169 862 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 TMCC2O75069 709 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 TSPAN9O75954 239 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 ANGPTL1O95841 491 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 ANXA6P08133 673 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 TCF3P15923 654 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 DDX5P17844 614 aaKnown RBP12.72□□□□□ -0.37
SMAD1-215ENST00000515385 POLR2CP19387 275 aaPredicted RBP12.72□□□□□ -0.37
SMAD1-215ENST00000515385 ALDH4A1P30038 563 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 TSPY1Q01534 308 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 PYCR3Q53H96 274 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 YIF1BQ5BJH7 314 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 PCID2Q5JVF3 399 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 SNAP47Q5SQN1 464 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 STRIP1Q5VSL9 837 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 SULT1C3Q6IMI6 304 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 MPZL3Q6UWV2 235 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 ZBTB8OSQ8IWT0 167 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 NATD1Q8N6N6 113 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 ITFG1Q8TB96 612 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 SETD6Q8TBK2 473 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 DNAJB14Q8TBM8 379 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 POP5Q969H6 163 aaKnown RBP12.72□□□□□ -0.37
SMAD1-215ENST00000515385 TSPAN17Q96FV3 270 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 VAT1Q99536 393 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 CYP4F12Q9HCS2 524 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 RPRD1BQ9NQG5 326 aaKnown RBP12.72□□□□□ -0.37
SMAD1-215ENST00000515385 KCNH4Q9UQ05 1017 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 SPEF1Q9Y4P9 236 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 PEX16Q9Y5Y5 336 aa12.72□□□□□ -0.37
SMAD1-215ENST00000515385 ATP6AP2A0A1C7CYW4 349 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 NEMP2A6NFY4 417 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 ATP6AP2O75787 350 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 MT-ND1P03886 318 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 NR3C2P08235 984 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 ITGAMP11215 1152 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 PSMB9P28065 219 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 NOS2P35228 1153 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 ETV6P41212 452 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 TAS2R39P59534 338 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 RACK1P63244 317 aaKnown RBP12.71□□□□□ -0.37
SMAD1-215ENST00000515385 STARD3Q14849 445 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 PCSK7Q16549 785 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 PKDCCQ504Y2 493 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 RABL3Q5HYI8 236 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 TPRG1LQ5T0D9 272 aa12.71□□□□□ -0.37
SMAD1-215ENST00000515385 MAP1SQ66K74 1059 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms