RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ASF1BQ9NVP2 202 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 SCHIP1Q9P0W5 487 aaPredicted RBP10.78□□□□□ -0.68
DDX41-216ENST00000513562 SEMA5BQ9P283 1151 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 EPHA6Q9UF33 1036 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 RARRES3Q9UL19 164 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 G3BP2Q9UN86 482 aaKnown RBP10.78□□□□□ -0.68
DDX41-216ENST00000513562 ENTPD4Q9Y227 616 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 CELSR1Q9NYQ6 3014 aa10.78□□□□□ -0.68
DDX41-216ENST00000513562 APCP25054 2843 aa10.77□□□□□ -0.68
DDX41-216ENST00000513562 A0A0J9YYE9 177 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 FADS2P1A8MWK0 482 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 GRID2O43424 1007 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 NUAK1O60285 661 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 TMEM63AO94886 807 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 VIPP01282 170 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 TRBC1P01850 177 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 FOLR1P15328 257 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 DESP17661 470 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 SOX5P35711 763 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 SLC19A1P41440 591 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 ITGA1P56199 1179 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 DPYSQ14117 519 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 NAA30Q147X3 362 aaPredicted RBP10.77□□□□□ -0.69
DDX41-216ENST00000513562 TPD52L1Q16890 204 aaPredicted RBP10.77□□□□□ -0.69
DDX41-216ENST00000513562 ERMARDQ5T6L9 678 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 HENMT1Q5T8I9 393 aaKnown RBP10.77□□□□□ -0.69
DDX41-216ENST00000513562 IZUMO3Q5VZ72 239 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 ZNF517Q6ZMY9 492 aaPredicted RBP10.77□□□□□ -0.69
DDX41-216ENST00000513562 FAM92BQ6ZTR7 304 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 BPHLQ86WA6 291 aaPredicted RBP10.77□□□□□ -0.69
DDX41-216ENST00000513562 TRIM48Q8IWZ4 208 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 NDUFAF2Q8N183 169 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 BBS5Q8N3I7 341 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 GLIS1Q8NBF1 620 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 ZDHHC12Q96GR4 267 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 SLC41A2Q96JW4 573 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 RANBP9Q96S59 729 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 PEBP4Q96S96 227 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 SMAD5Q99717 465 aaKnown RBP10.77□□□□□ -0.69
DDX41-216ENST00000513562 BARD1Q99728 777 aaKnown RBP10.77□□□□□ -0.69
DDX41-216ENST00000513562 SNRNP25Q9BV90 132 aaKnown RBP10.77□□□□□ -0.69
DDX41-216ENST00000513562 RAB33BQ9H082 229 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 POT1Q9NUX5 634 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 ZNF624Q9P2J8 865 aaPredicted RBP10.77□□□□□ -0.69
DDX41-216ENST00000513562 DNPEPQ9ULA0 475 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 FARSAQ9Y285 508 aaKnown RBP10.77□□□□□ -0.69
DDX41-216ENST00000513562 HIVEP3Q5T1R4 2406 aa10.77□□□□□ -0.69
DDX41-216ENST00000513562 NF1P21359 2839 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 ESPL1Q14674 2120 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 MED13Q9UHV7 2174 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 IGHV5-51A0A0C4DH38 117 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 ARHGAP10A1A4S6 786 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 PES1O00541 588 aaKnown RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 MAFKO60675 156 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 CPNE3O75131 537 aaKnown RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 ZNF8P17098 575 aaPredicted RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 MMP13P45452 471 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 HCAR3P49019 387 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 ZNF135P52742 658 aaPredicted RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 PDE1BQ01064 536 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 PLEKHN1Q494U1 663 aaPredicted RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 PPP6R3Q5H9R7 873 aaPredicted RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 IRGCQ6NXR0 463 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 DCUN1D2Q6PH85 259 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 CYP4V2Q6ZWL3 525 aaPredicted RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 RBM12BQ8IXT5 1001 aaKnown RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 ARFGAP1Q8N6T3 406 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 MLKLQ8NB16 471 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 SIDT2Q8NBJ9 832 aaKnown RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 UBXN4Q92575 508 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 UNKQ9C0B0 810 aaKnown RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 OSGEPL1Q9H4B0 414 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 SLC40A1Q9NP59 571 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 WASH6PQ9NQA3 447 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 FAM207AQ9NSI2 230 aaPredicted RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 KLC4Q9NSK0 619 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 GPR83Q9NYM4 423 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 CWC15Q9P013 229 aaKnown RBP10.76□□□□□ -0.69
DDX41-216ENST00000513562 ATXN10Q9UBB4 475 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 SIK3Q9Y2K2 1263 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 AKAP9Q99996 3911 aa10.76□□□□□ -0.69
DDX41-216ENST00000513562 PDZD2O15018 2839 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 A6NL46 340 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 GPR89AB7ZAQ6 455 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 ZNF185O15231 689 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 MTA2O94776 668 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 CLDN7O95471 211 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 JCHAINP01591 159 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 EBLN1P0CF75 366 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 GPR89BP0CG08 455 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 BRAFP15056 766 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 VAV2P52735 878 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 POLR2FP61218 127 aaKnown RBP10.75□□□□□ -0.69
DDX41-216ENST00000513562 PPP1CAP62136 330 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 ACY1Q03154 408 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 GPS2Q13227 327 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 ELOAQ14241 798 aaKnown RBP10.75□□□□□ -0.69
DDX41-216ENST00000513562 GPR18Q14330 331 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 KCNAB1Q14722 419 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms