RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 POLR3BQ9NW08 1133 aaPredicted RBP8.03□□□□□ -1.12
DDR1-273ENST00000513514 ASIC5Q9NY37 505 aa8.03□□□□□ -1.12
DDR1-273ENST00000513514 SFMBT1Q9UHJ3 866 aa8.03□□□□□ -1.12
DDR1-273ENST00000513514 ANAPC2Q9UJX6 822 aa8.03□□□□□ -1.12
DDR1-273ENST00000513514 BLOC1S6Q9UL45 172 aa8.03□□□□□ -1.12
DDR1-273ENST00000513514 RNF112Q9ULX5 631 aa8.03□□□□□ -1.12
DDR1-273ENST00000513514 MAFFQ9ULX9 164 aa8.03□□□□□ -1.12
DDR1-273ENST00000513514 PCDHB3Q9Y5E6 796 aa8.03□□□□□ -1.12
DDR1-273ENST00000513514 TIMM13Q9Y5L4 95 aaPredicted RBP8.03□□□□□ -1.12
DDR1-273ENST00000513514 CEPT1Q9Y6K0 416 aa8.03□□□□□ -1.12
DDR1-273ENST00000513514 EME2A4GXA9 379 aaPredicted RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 FAM86C2PA6NEL3 165 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 TRIM64BA6NI03 449 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 CCDC154A6NI56 674 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 UBFD1O14562 309 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 MRPS14O60783 128 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 RHOBTB1O94844 696 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 SORBS2O94875 1100 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 PRSS23O95084 383 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 FKBP9O95302 570 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 PGM3O95394 542 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 GOT2P00505 430 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 LDLRP01130 860 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 JUNP05412 331 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 HGFP14210 728 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 JUNBP17275 347 aaPredicted RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 RPS3P23396 243 aaKnown RBP eCLIP8.02□□□□□ -1.13
DDR1-273ENST00000513514 SLC6A2P23975 617 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 RFC2P35250 354 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 CAPGP40121 348 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 THPOP40225 353 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 GRIA3P42263 894 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 ABCG1P45844 678 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 TUFMP49411 452 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 KCNQ1P51787 676 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 ZNF140P52738 457 aaPredicted RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 CDKN2DP55273 166 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 GPR17Q13304 367 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 IL18R1Q13478 541 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 BIRC2Q13490 618 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 PEX6Q13608 980 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 SPIDRQ14159 915 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 LPIN1Q14693 890 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 CBX2Q14781 532 aaPredicted RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 PCBP2Q15366 365 aaKnown RBP eCLIP8.02□□□□□ -1.133e-6■■■■□ 25.7
DDR1-273ENST00000513514 PCSK7Q16549 785 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 MYLK3Q32MK0 819 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 SLC39A12Q504Y0 691 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 INO80DQ53TQ3 878 aaPredicted RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 RBM48Q5RL73 367 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 TTC23Q5W5X9 447 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 FBXL22Q6P050 247 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 TTC33Q6PID6 262 aaPredicted RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 MSANTD1Q6ZTZ1 278 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 PTAR1Q7Z6K3 402 aaPredicted RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 SVOPLQ8N434 492 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 GALNT4Q8N4A0 578 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 DHRSXQ8N5I4 330 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 PCDH20Q8N6Y1 951 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 KLHDC9Q8NEP7 349 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 HMGCLL1Q8TB92 370 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 GIPC2Q8TF65 315 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 ANKRD49Q8WVL7 239 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 LRTOMTQ8WZ04 291 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 FBXO32Q969P5 355 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 PSMG2Q969U7 264 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 SLCO4A1Q96BD0 722 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 TBC1D20Q96BZ9 403 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 PABPC5Q96DU9 382 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 PPP3R2Q96LZ3 170 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 TBATAQ96M53 351 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 RPRD1AQ96P16 312 aaPredicted RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 ZBTB18Q99592 522 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 SEMA3CQ99985 751 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 TMEM175Q9BSA9 504 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 TSEN34Q9BSV6 310 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 LRFN3Q9BTN0 628 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 UGT2B28Q9BY64 529 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 PBX4Q9BYU1 374 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 HIPK3Q9H422 1215 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 ALG2Q9H553 416 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 EPHX3Q9H6B9 360 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 GORASP2Q9H8Y8 452 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 NMUR1Q9HB89 426 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 PLGRKTQ9HBL7 147 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 SLC52A3Q9NQ40 469 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 MAP10Q9P2G4 905 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 TRMT6Q9UJA5 497 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 DNMT3LQ9UJW3 386 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 APPL1Q9UKG1 709 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 CNOT6Q9ULM6 557 aaKnown RBP8.02□□□□□ -1.13
DDR1-273ENST00000513514 MAPRE3Q9UPY8 281 aa8.02□□□□□ -1.13
DDR1-273ENST00000513514 NLRC5Q86WI3 1866 aa8.01□□□□□ -1.13
DDR1-273ENST00000513514 RNF103-CHMP3A0A140T963 221 aa8.01□□□□□ -1.13
DDR1-273ENST00000513514 E2F8A0AVK6 867 aa8.01□□□□□ -1.13
DDR1-273ENST00000513514 CCDC78A2IDD5 438 aa8.01□□□□□ -1.13
DDR1-273ENST00000513514 CCDC162PA2VCL2 907 aa8.01□□□□□ -1.13
DDR1-273ENST00000513514 C7orf72A4D263 438 aa8.01□□□□□ -1.13
DDR1-273ENST00000513514 NEMP2A6NFY4 417 aa8.01□□□□□ -1.13
DDR1-273ENST00000513514 CCDC160A6NGH7 325 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms