RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 SLC24A2Q9UI40 661 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 ZNF180Q9UJW8 692 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 VPS9D1Q9Y2B5 631 aa12.41□□□□□ -0.42
PDPN-210ENST00000513143 MEI4A8MW99 385 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 MAP2K7O14733 419 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 OR1I1O60431 355 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 NDUFS3O75489 264 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 FAM155BO75949 473 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 INHBAP08476 426 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 F7P08709 466 aaPredicted RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 ZNF7P17097 686 aaPredicted RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 MSH2P43246 934 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 ADARP55265 1226 aaKnown RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 CLDN2P57739 230 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 PFN3P60673 137 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 B4GALNT1Q00973 533 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 IFFO1Q0D2I5 559 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 ILF2Q12905 390 aaKnown RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 RASA2Q15283 850 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 PLK5Q496M5 336 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 KHDC1Q4VXA5 237 aaKnown RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 PMS2CLQ68D20 193 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 CNSTQ6PJW8 725 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 ADGRD1Q6QNK2 874 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 KYAT3Q6YP21 454 aaKnown RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 KDM7AQ6ZMT4 941 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 ZC3HC1Q86WB0 502 aaKnown RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 TDRPQ86YL5 185 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 RBFAQ8N0V3 343 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 C1orf216Q8TAB5 229 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 GDAP1Q8TB36 358 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 FAM174AQ8TBP5 190 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 FUBP1Q96AE4 644 aaKnown RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 MRRFQ96E11 262 aaKnown RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 ZC3H10Q96K80 434 aaKnown RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 RBBP8Q99708 897 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 BOCQ9BWV1 1114 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 LGR4Q9BXB1 951 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 VIPAS39Q9H9C1 493 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 TRIM39Q9HCM9 518 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 PHPT1Q9NRX4 125 aaPredicted RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 ZNF446Q9NWS9 450 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 EIF2B4Q9UI10 523 aaKnown RBP12.4□□□□□ -0.42
PDPN-210ENST00000513143 CA5BQ9Y2D0 317 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 OR1A2Q9Y585 309 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 PCDHGA2Q9Y5H1 932 aa12.4□□□□□ -0.42
PDPN-210ENST00000513143 SDK1Q7Z5N4 2213 aa12.4□□□□□ -0.43
PDPN-210ENST00000513143 A6NNZ2 444 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 H0Y8X5 98 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 PRMT5O14744 637 aaPredicted RBP12.39□□□□□ -0.43
PDPN-210ENST00000513143 LILRB5O75023 590 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 MTX2O75431 263 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 MYCLP1P12525 358 aaPredicted RBP12.39□□□□□ -0.43
PDPN-210ENST00000513143 MSH3P20585 1137 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 RPS3P23396 243 aaKnown RBP eCLIP12.39□□□□□ -0.43
PDPN-210ENST00000513143 NSG1P42857 185 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 CD151P48509 253 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 SERPINB9P50453 376 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 LIMK2P53671 638 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 KIAA1024LP59773 190 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 YPEL5P62699 121 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 ZNF844Q08AG5 666 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 TMEM115Q12893 351 aaPredicted RBP12.39□□□□□ -0.43
PDPN-210ENST00000513143 WDR45BQ5MNZ6 344 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 ADGRG6Q86SQ4 1221 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 EPS8L3Q8TE67 593 aaKnown RBP12.39□□□□□ -0.43
PDPN-210ENST00000513143 CCDC97Q96F63 343 aaPredicted RBP12.39□□□□□ -0.43
PDPN-210ENST00000513143 DCUN1D1Q96GG9 259 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 BIRC8Q96P09 236 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 P2RY12Q9H244 342 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 RHOJQ9H4E5 214 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 EURLQ9NYK6 297 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 CORO1CQ9ULV4 474 aaPredicted RBP12.39□□□□□ -0.43
PDPN-210ENST00000513143 CRYL1Q9Y2S2 319 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 OAS3Q9Y6K5 1087 aaKnown RBP12.39□□□□□ -0.43
PDPN-210ENST00000513143 IKBKGQ9Y6K9 419 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 SLCO1B1Q9Y6L6 691 aa12.39□□□□□ -0.43
PDPN-210ENST00000513143 UBA6A0AVT1 1052 aaPredicted RBP12.38□□□□□ -0.43
PDPN-210ENST00000513143 CFAP99D6REC4 459 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 CACNB4O00305 520 aaPredicted RBP12.38□□□□□ -0.43
PDPN-210ENST00000513143 RASGRF2O14827 1237 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 VEGFDO43915 354 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 CDH16O75309 829 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 RALBP11234 206 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 ATP1B2P14415 290 aaPredicted RBP12.38□□□□□ -0.43
PDPN-210ENST00000513143 CNTFP26441 200 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 MAOBP27338 520 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 AKT1P31749 480 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 SPRP35270 261 aaPredicted RBP12.38□□□□□ -0.43
PDPN-210ENST00000513143 ABCG1P45844 678 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 RABIFP47224 123 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 RACK1P63244 317 aaKnown RBP12.38□□□□□ -0.43
PDPN-210ENST00000513143 ZNF648Q5T619 568 aaPredicted RBP12.38□□□□□ -0.43
PDPN-210ENST00000513143 ZNF549Q6P9A3 640 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 Q6ZSR6 202 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 TRIM74Q86UV6 250 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 CNPY4Q8N129 248 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 RIBC1Q8N443 379 aaPredicted RBP12.38□□□□□ -0.43
PDPN-210ENST00000513143 VPS39Q96JC1 886 aa12.38□□□□□ -0.43
PDPN-210ENST00000513143 SLC6A18Q96N87 628 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms