RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CYP2F1P24903 491 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TPP2P29144 1249 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TGFBR1P36897 503 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SYKP43405 635 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RGS8P57771 180 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAB2AP61019 212 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 BTN3A2P78410 334 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PURAQ00577 322 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 OLIG2Q13516 323 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 GALNT3Q14435 633 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SEMA3AQ14563 771 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 LLGL1Q15334 1064 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMED2Q15363 201 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYTH1Q15438 398 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CNGA3Q16281 694 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCSK7Q16549 785 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CA9Q16790 459 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZBTB37Q5TC79 503 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HLA-DQA1Q5Y7H0 255 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NAIF1Q69YI7 327 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 IKBIPQ70UQ0 350 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 BTN2A1Q7KYR7 527 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SZRD1Q7Z422 152 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPATS2Q86XZ4 545 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NIM1KQ8IY84 436 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PEX5LQ8IYB4 626 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALLCQ8N6M5 410 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF527Q8NB42 609 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NPLOC4Q8TAT6 608 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM172AQ8WUF8 416 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 C7orf34Q96L11 122 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RILPQ96NA2 401 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PARK7Q99497 189 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MNTQ99583 582 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 H2AFJQ9BTM1 129 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TBCDQ9BTW9 1192 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 VN1R3Q9BXE9 311 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 EBF3Q9H4W6 596 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARMC7Q9H6L4 198 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 EPS8L2Q9H6S3 715 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARNT2Q9HBZ2 717 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNK9Q9NPC2 374 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 LHX9Q9NQ69 397 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 FBXO8Q9NRD0 319 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 AGPAT4Q9NRZ5 378 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRMT7Q9NVM4 692 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RBM22Q9NW64 420 aaKnown RBP eCLIP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CYP39A1Q9NYL5 469 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLIC5Q9NZA1 410 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 AFF4Q9UHB7 1163 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 YBX2Q9Y2T7 364 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 UTP11Q9Y3A2 253 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPO11Q9Y5K1 396 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCYT1BQ9Y5K3 369 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 V9GYH0 126 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 IGLV3-10A0A075B6K4 115 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAGEB6P1A0A0J9YX57 407 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR5K3A6NET4 321 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRIQ4A6NIV6 560 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TBKBP1A7MCY6 615 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TPST2O60704 377 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 RNGTTO60942 597 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANP32DO95626 131 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 IFNA14P01570 189 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC35E2BP0CK96 405 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PIK3R1P27986 724 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 EEF1DP29692 281 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MCM7P33993 719 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 PEX19P40855 299 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNA2P51530 1060 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHN2P52757 468 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 UBXN2AP68543 259 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HTRA3P83110 453 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TGM3Q08188 693 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ITKQ08881 620 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 GTF2H3Q13889 308 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 WTAPQ15007 396 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIP6Q15654 476 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 HIST2H2ACQ16777 129 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC157Q569K6 752 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 EAPPQ56P03 285 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZRANB3Q5FWF4 1079 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM255AQ5JRV8 349 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 EOGTQ5NDL2 527 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLC3Q6P597 504 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ABRAXAS1Q6UWZ7 409 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 KIAA1324Q6UXG2 1013 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 NEK10Q6ZWH5 1172 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MARK2Q7KZI7 788 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 FGD2Q7Z6J4 655 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 UNC45BQ8IWX7 931 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MCEMP1Q8IX19 187 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM9CQ8IZT9 166 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZCCHC9Q8N567 271 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 TP53I13Q8NBR0 393 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 MCOLN3Q8TDD5 553 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHURC1Q8WUH1 139 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDHR1Q96JP9 859 aa1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CNOT6LQ96LI5 555 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC17Q96LX7 622 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms