RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ATMINO43313 823 aaPredicted RBP18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 CLDN7O95471 211 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 FOLR1P15328 257 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 XRCC1P18887 633 aaPredicted RBP18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 AMPD1P23109 780 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 PSMA2P25787 234 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 PTPN4P29074 926 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 MIPP30301 263 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 NR6A1Q15406 480 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 TCP11X2Q5H9J9 407 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 CACHD1Q5VU97 1274 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 FAM69BQ5VUD6 431 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 FAM92BQ6ZTR7 304 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 PPP1R3BQ86XI6 285 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 RANBP9Q96S59 729 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 NUDT9Q9BW91 350 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 ACSS2Q9NR19 701 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 SEPT11Q9NVA2 429 aaKnown RBP18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 ATXN10Q9UBB4 475 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 SEC16AO15027 2179 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 PIKFYVEQ9Y2I7 2098 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 OR5K4A6NMS3 321 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 EIF3CLB5ME19 914 aaKnown RBP18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 GRID2O43424 1007 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 NUAK1O60285 661 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 CBX6O95503 412 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 PRLP01236 227 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 SLC2A4P14672 509 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 BRAFP15056 766 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 ZNF30P17039 623 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 ZNF8P17098 575 aaPredicted RBP18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 AMD1P17707 334 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 NELFEP18615 380 aaKnown RBP18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 ELAVL4P26378 380 aaKnown RBP18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 HCAR3P49019 387 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 MAMLD1Q13495 774 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 HENMT1Q5T8I9 393 aaKnown RBP18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 FDCSPQ8NFU4 85 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 ADAMTS17Q8TE56 1095 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 THAP4Q8WY91 577 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 EIF3CQ99613 913 aaKnown RBP18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 NT5MQ9NPB1 228 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 KLC4Q9NSK0 619 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 MAP10Q9P2G4 905 aa18.72■□□□□ 0.59
HMGCS1-206ENST00000511774 IGHV5-51A0A0C4DH38 117 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 PYGLP06737 847 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 TCF4P15884 667 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 MMP13P45452 471 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 CAPZBP47756 277 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 CLCNKAP51800 687 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 CHRNA6Q15825 494 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 PLA2G4EQ3MJ16 856 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 SNRNP40Q96DI7 357 aaKnown RBP18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 PHF12Q96QT6 1004 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 AGPAT1Q99943 283 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 OSGEPL1Q9H4B0 414 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 CHKBQ9Y259 395 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 ZNF451Q9Y4E5 1061 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 NF1P21359 2839 aa18.71■□□□□ 0.59
HMGCS1-206ENST00000511774 MT-ND3P03897 115 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 IL1R2P27930 398 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 TUBB3Q13509 450 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 RALGPS1Q5JS13 557 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 LCN10Q6JVE6 187 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 SYVN1Q86TM6 617 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 PHYKPLQ8IUZ5 450 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 AOPEPQ8N6M6 819 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 SLC41A2Q96JW4 573 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 GPR87Q9BY21 358 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 SLC29A3Q9BZD2 475 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 OR2AG1Q9H205 316 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 CARD9Q9H257 536 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 RMI1Q9H9A7 625 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 SLAMF7Q9NQ25 335 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 ASF1BQ9NVP2 202 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 TACC2O95359 2948 aa18.7■□□□□ 0.58
HMGCS1-206ENST00000511774 OR52A4PA6NMU1 304 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 VIPP01282 170 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 SPINT3P49223 89 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 RIPPLY3P57055 190 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 DSC2Q02487 901 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 GPR18Q14330 331 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 SEPT7Q16181 437 aaKnown RBP18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 MARC1Q5VT66 337 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 PLEKHA7Q6IQ23 1121 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 ACAD10Q6JQN1 1059 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 IRGCQ6NXR0 463 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 CRTC3Q6UUV7 619 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 TEX26Q8N6G2 289 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 SLC38A9Q8NBW4 561 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 PNPLA2Q96AD5 504 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 EID2BQ96D98 161 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 SLC40A1Q9NP59 571 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 SEMA5BQ9P283 1151 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 FARSAQ9Y285 508 aaKnown RBP18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 SLC5A6Q9Y289 635 aa18.69■□□□□ 0.58
HMGCS1-206ENST00000511774 MTORP42345 2549 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 TMEM191CA6NGB0 347 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 A6NL46 340 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms