RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 ACVR2AP27037 513 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 HIBADHP31937 336 aaKnown RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 TGFBR1P36897 503 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 NSFP46459 744 aaKnown RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 LIG4P49917 911 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 MAP2K6P52564 334 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 DGKQP52824 942 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 GBX2P52951 348 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 CRADDP78560 199 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 ZNF543Q08ER8 600 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 TRAF3Q13114 568 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 INPP5AQ14642 412 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 ZIK1Q3SY52 487 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 SAMD4BQ5PRF9 694 aaKnown RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 C6orf141Q5SZD1 244 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 KRT39Q6A163 491 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 LAMTOR1Q6IAA8 161 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 DPP8Q6V1X1 898 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 ZBTB33Q86T24 672 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 DPP9Q86TI2 863 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 COMMD7Q86VX2 200 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 PLD6Q8N2A8 252 aaKnown RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 DNAJA4Q8WW22 397 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 ASB12Q8WXK4 309 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 SLC9A6Q92581 669 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 RORBQ92753 470 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 SGTBQ96EQ0 304 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 GJD4Q96KN9 370 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 UBXN10Q96LJ8 280 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 APOL4Q9BPW4 351 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 MLPHQ9BV36 600 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 WDR18Q9BV38 432 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 CCDC90BQ9GZT6 254 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 LHX5Q9H2C1 402 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 CHRAC1Q9NRG0 131 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 SARDHQ9UL12 918 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 TLR6Q9Y2C9 796 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 ANKRD6Q9Y2G4 727 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 RPH3AQ9Y2J0 694 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-208ENST00000511604 PCDHA1Q9Y5I3 950 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 GJA3Q9Y6H8 435 aa7.28□□□□□ -1.24
CPNE4-208ENST00000511604 CCDC182A6NF36 153 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 BTN3A3O00478 584 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 TFECO14948 347 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 C1QBP02746 253 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 FTH1P02794 183 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 C2P06681 752 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 HSMCR30P0CW71 290 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SOX11P35716 441 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SERPINB9P50453 376 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 ERVK-8P63133 956 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 EMX1Q04741 257 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 IQCCQ4KMZ1 466 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 C4orf46Q504U0 113 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 DENND5AQ6IQ26 1287 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 LIMS2Q7Z4I7 341 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 RETREG3Q86VR2 466 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SCUBE3Q8IX30 993 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 GPALPP1Q8IXQ4 340 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 C8orf59Q8N0T1 100 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 OR8H3Q8N146 312 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 YIPF7Q8N8F6 280 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 ZNF557Q8N988 423 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 ZNF565Q8N9K5 539 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 BLOC1S5Q8TDH9 187 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SMG7Q92540 1137 aaKnown RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 RPL3LQ92901 407 aaKnown RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 LPPQ93052 612 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 PTERQ96BW5 349 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SIPA1Q96FS4 1042 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 LXNQ9BS40 222 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 TINAGL1Q9GZM7 467 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 FAM49AQ9H0Q0 323 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SMOC2Q9H3U7 446 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 POPDC2Q9HBU9 364 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 ING3Q9NXR8 418 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 CACNA2D2Q9NY47 1150 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 PGAP2Q9UHJ9 254 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 MKLN1Q9UL63 735 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 DTX4Q9Y2E6 619 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 ACOT9Q9Y305 439 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 PCDHB3Q9Y5E6 796 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 PCNTO95613 3336 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 CCDC78A2IDD5 438 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SH3D21A4FU49 640 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 AQP12BA6NM10 295 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 DDX39AO00148 427 aaKnown RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 NFIBO00712 420 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 TPP1O14773 563 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 PPEF1O14829 653 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SYN3O14994 580 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 STX7O15400 261 aaKnown RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 NUPL2O15504 423 aaKnown RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 FZD6O60353 706 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 WDPCPO95876 746 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 RPS17P08708 135 aaKnown RBP7.27□□□□□ -1.25
CPNE4-208ENST00000511604 SNHG28P0DPA3 235 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 FCGR1AP12314 374 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 CAPZA2P47755 286 aa7.27□□□□□ -1.25
CPNE4-208ENST00000511604 NOMO3P69849 1222 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms