RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ANKRD28O15084 1053 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 SLC16A5O15375 505 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 KCNN4O15554 427 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 KCNAB3O43448 404 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 TIMM44O43615 452 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 RFPL2O75678 378 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 PGM3O95394 542 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 GH2P01242 217 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 AFPP02771 609 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 HNRNPCL4P0DMR1 293 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 CORO1AP31146 461 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 APOBEC1P41238 236 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 FASLGP48023 281 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 AMPHP49418 695 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 CD81P60033 236 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 NFATC4Q14934 902 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 PCLAFQ15004 111 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 SF3B4Q15427 424 aaKnown RBP eCLIP3.36□□□□□ -1.872e-6■■■□□ 17.4
TRAPPC11-207ENST00000511409 MEP1AQ16819 746 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 LCE1AQ5T7P2 110 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 IRAK1BP1Q5VVH5 260 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 BRAT1Q6PJG6 821 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 DNAAF5Q86Y56 855 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 NRROSQ86YC3 692 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 SPATA2LQ8IUW3 424 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 C9orf106Q8NAJ2 232 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZNF114Q8NC26 417 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 SMRP1Q8NCR6 262 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 ACVR1CQ8NER5 493 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 SLC44A1Q8WWI5 657 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 PRPF31Q8WWY3 499 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 ADGRG7Q96K78 797 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 LYZL4Q96KX0 146 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 PCYT2Q99447 389 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 KLHL4Q9C0H6 718 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 HIPK2Q9H2X6 1198 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 PCDH9Q9HC56 1237 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 CHMP1AQ9HD42 196 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 TAS2R14Q9NYV8 317 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZNF224Q9NZL3 707 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 POLG2Q9UHN1 485 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 PADI3Q9ULW8 664 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 PLAGL1Q9UM63 463 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 PPIEQ9UNP9 301 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 EXO1Q9UQ84 846 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 VDAC3Q9Y277 283 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 TAF1P21675 1872 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 LOC100509620A0A075B734 347 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 HNRNPCL2B2RXH8 293 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 FAM90A26D6RGX4 464 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 SH2B2O14492 632 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 TCERG1O14776 1098 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 CLGNO14967 610 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 MID1O15344 667 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZWINTO95229 277 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZBTB11O95625 1053 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 PMS2P2O95744 297 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 LINC00271P0C7V0 271 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 GJA1P17302 382 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 S1PR1P21453 382 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 UGT1A1P22309 533 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 HRH2P25021 359 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 MMP14P50281 582 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 HSD17B4P51659 736 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 PNLIPRP2P54317 469 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 CLDN20P56880 219 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 DSCR9P59020 149 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 ISL1P61371 349 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 SEC61A1P61619 476 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 COG7P83436 770 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 DLG1Q12959 904 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 TMEM266Q2M3C6 531 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 TMEM35AQ53FP2 167 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 SETMARQ53H47 684 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZDHHC20Q5W0Z9 365 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 PAPD4Q6PIY7 484 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 SFR1Q86XK3 245 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 MCEMP1Q8IX19 187 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 ODF3L1Q8IXM7 274 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 RNF113BQ8IZP6 322 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 SLC5A8Q8N695 610 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 LSMEM1Q8N8F7 131 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 AVL9Q8NBF6 648 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 KCNH5Q8NCM2 988 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 OR5R1Q8NH85 324 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 LILRB1Q8NHL6 650 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 PPP4R1Q8TF05 950 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 SLC38A5Q8WUX1 472 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 NUDCD2Q8WVJ2 157 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 PIGTQ969N2 578 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 LRRC59Q96AG4 307 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 ERP27Q96DN0 273 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 GCNAQ96QF7 691 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 ABHD1Q96SE0 405 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 WACQ9BTA9 647 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 HGH1Q9BTY7 390 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 RTN4RQ9BZR6 473 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms