RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 FAM117AQ9C073 453 aa12.48□□□□□ -0.41
KDM3B-206ENST00000509468 OR2AG1Q9H205 316 aa12.48□□□□□ -0.41
KDM3B-206ENST00000509468 TSPY26PQ9H489 355 aa12.48□□□□□ -0.41
KDM3B-206ENST00000509468 TRABDQ9H4I3 376 aa12.48□□□□□ -0.41
KDM3B-206ENST00000509468 UCK1Q9HA47 277 aa12.48□□□□□ -0.41
KDM3B-206ENST00000509468 KLC4Q9NSK0 619 aa12.48□□□□□ -0.41
KDM3B-206ENST00000509468 OCIAD1Q9NX40 245 aa12.48□□□□□ -0.41
KDM3B-206ENST00000509468 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.48□□□□□ -0.41
KDM3B-206ENST00000509468 ZNF711Q9Y462 761 aa12.48□□□□□ -0.41
KDM3B-206ENST00000509468 PCDHGA4Q9Y5G9 962 aa12.48□□□□□ -0.41
KDM3B-206ENST00000509468 PCYT1BQ9Y5K3 369 aaPredicted RBP12.48□□□□□ -0.41
KDM3B-206ENST00000509468 B3GALT1Q9Y5Z6 326 aa12.48□□□□□ -0.41
KDM3B-206ENST00000509468 A6NCN8 305 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 A8MU76 341 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
KDM3B-206ENST00000509468 CHUKO15111 745 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 CST8O60676 142 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 KCNJ13O60928 360 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 PMPCBO75439 489 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 ZRANB2O95218 330 aaKnown RBP eCLIP12.47□□□□□ -0.41
KDM3B-206ENST00000509468 MT-CYBP00156 380 aaPredicted RBP12.47□□□□□ -0.41
KDM3B-206ENST00000509468 PIRTP0C851 137 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 PTPN3P26045 913 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 MAP4P27816 1152 aaKnown RBP12.47□□□□□ -0.41
KDM3B-206ENST00000509468 UGT1A3P35503 534 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 CDKN2BP42772 138 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 MAGEA1P43355 309 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 NOP2P46087 812 aaKnown RBP12.47□□□□□ -0.41
KDM3B-206ENST00000509468 HADHBP55084 474 aaKnown RBP12.47□□□□□ -0.41
KDM3B-206ENST00000509468 SRSF6Q13247 344 aaKnown RBP12.47□□□□□ -0.41
KDM3B-206ENST00000509468 TAZQ16635 292 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 ZDHHC20Q5W0Z9 365 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 ALS2CLQ60I27 953 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 MFSD7Q6UXD7 560 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 CEACAM20Q6UY09 585 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 ADGRG6Q86SQ4 1221 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 LRRTM4Q86VH4 590 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 BMPERQ8N8U9 685 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 SPATA22Q8NHS9 363 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 JPH3Q8WXH2 748 aaPredicted RBP12.47□□□□□ -0.41
KDM3B-206ENST00000509468 P3H4Q92791 437 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 EXTL1Q92935 676 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 PLEKHG4BQ96PX9 1271 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 VAT1Q99536 393 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 EFHD1Q9BUP0 239 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 PRDM8Q9NQV8 689 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 TMEM9Q9P0T7 183 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 FAM153AQ9UHL3 310 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.47□□□□□ -0.41
KDM3B-206ENST00000509468 ADGRG1Q9Y653 693 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 ALG6Q9Y672 507 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 SDK2Q58EX2 2172 aa12.47□□□□□ -0.41
KDM3B-206ENST00000509468 LOC285095A0A1B0GVY8 99 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 PSTPIP1O43586 416 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 CDK14O94921 469 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 VIPP01282 170 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 ZNF7P17097 686 aaPredicted RBP12.46□□□□□ -0.41
KDM3B-206ENST00000509468 BPIP17213 487 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 VCLP18206 1134 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 IDSP22304 550 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 HMGCLP35914 325 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 MAPK9P45984 424 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 ARSDP51689 593 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 TMEM115Q12893 351 aaPredicted RBP12.46□□□□□ -0.41
KDM3B-206ENST00000509468 PRKD1Q15139 912 aaPredicted RBP12.46□□□□□ -0.41
KDM3B-206ENST00000509468 TBR1Q16650 682 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 INSCQ1MX18 579 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 TFDP3Q5H9I0 405 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 ZNF648Q5T619 568 aaPredicted RBP12.46□□□□□ -0.41
KDM3B-206ENST00000509468 ANKS6Q68DC2 871 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 TRIM48Q8IWZ4 208 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 CACNA2D3Q8IZS8 1091 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 DTX3LQ8TDB6 740 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 TTC25Q96NG3 672 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 VPS35Q96QK1 796 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 TIMM29Q9BSF4 260 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 SLC12A9Q9BXP2 914 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 TRIT1Q9H3H1 467 aaKnown RBP12.46□□□□□ -0.41
KDM3B-206ENST00000509468 OSGEPL1Q9H4B0 414 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 ARFGAP3Q9NP61 516 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 HACD3Q9P035 362 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 SAE1Q9UBE0 346 aaPredicted RBP12.46□□□□□ -0.41
KDM3B-206ENST00000509468 PILRAQ9UKJ1 303 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 HYOU1Q9Y4L1 999 aa12.46□□□□□ -0.41
KDM3B-206ENST00000509468 HEMK1Q9Y5R4 338 aaPredicted RBP12.46□□□□□ -0.41
KDM3B-206ENST00000509468 COL6A6A6NMZ7 2263 aa12.46□□□□□ -0.42
KDM3B-206ENST00000509468 CFAP46Q8IYW2 2715 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 LILRA5A6NI73 299 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 POLR1CO15160 346 aaPredicted RBP12.45□□□□□ -0.42
KDM3B-206ENST00000509468 TOX3O15405 576 aaPredicted RBP12.45□□□□□ -0.42
KDM3B-206ENST00000509468 RAD1O60671 282 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 SLC4A1P02730 911 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 AMD1P17707 334 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 UBE2IP63279 158 aaKnown RBP12.45□□□□□ -0.42
KDM3B-206ENST00000509468 TBX2Q13207 712 aaPredicted RBP12.45□□□□□ -0.42
KDM3B-206ENST00000509468 GTF2H3Q13889 308 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 AGAP9Q5VTM2 703 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 KAZNQ674X7 775 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 ABRAXAS1Q6UWZ7 409 aa12.45□□□□□ -0.42
KDM3B-206ENST00000509468 WASH2PQ6VEQ5 465 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms