RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	CCDC129	Q6ZRS4	1044 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	CREB3L2	Q70SY1	520 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	LRRTM4	Q86VH4	590 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	SFTPA2	Q8IWL1	248 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	NOC3L	Q8WTT2	800 aa	Known RBP	4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	RUFY2	Q8WXA3	655 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	TRIB2	Q92519	343 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	MPHOSPH8	Q99549	860 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	GAREM1	Q9H706	876 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	DCTPP1	Q9H773	170 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	OCIAD1	Q9NX40	245 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	ALKBH4	Q9NXW9	302 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	ZNF112	Q9UJU3	913 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	GJD2	Q9UKL4	321 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	PAM16	Q9Y3D7	125 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	PCDHGB5	Q9Y5G0	923 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	DGKB	Q9Y6T7	804 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165	MYO3B	Q8WXR4	1341 aa		4.17	□□□□□ -1.74
NFKB1-208	ENST00000509165		A0A0U1RQF3	1178 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165		A0A1B0GUL7	405 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	HSPB2	A8KAH6	182 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	CYSRT1	A8MQ03	144 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	WDHD1	O75717	1129 aa	Predicted RBP	4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	VNN2	O95498	520 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	HSD3B1	P14060	373 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	CCND3	P30281	292 aa	Predicted RBP	4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	FMO4	P31512	558 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	CLCN5	P51795	746 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	TUBA1B	P68363	451 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	TFCP2	Q12800	502 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	PPIL2	Q13356	520 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	HSPB2	Q16082	182 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	IZUMO4	Q1ZYL8	232 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	EDRF1	Q3B7T1	1238 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	SETMAR	Q53H47	684 aa	Predicted RBP	4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	FAM69B	Q5VUD6	431 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	RETSAT	Q6NUM9	610 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	NEK10	Q6ZWH5	1172 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	ASCL5	Q7RTU5	278 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	ADGRG6	Q86SQ4	1221 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	ERO1B	Q86YB8	467 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	SMC5	Q8IY18	1101 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	ZNF114	Q8NC26	417 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	ARRDC2	Q8TBH0	407 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	RTP4	Q96DX8	246 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	TXNDC15	Q96J42	360 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	UBXN10	Q96LJ8	280 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	TMEM39B	Q9GZU3	492 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	DDX31	Q9H8H2	851 aa	Known RBP	4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	ZNF556	Q9HAH1	456 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	OR6C3	Q9NZP0	311 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	DBNL	Q9UJU6	430 aa	Known RBP	4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	HSF4	Q9ULV5	492 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	PCDHGB1	Q9Y5G3	927 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	GREB1L	Q9C091	1923 aa	Predicted RBP	4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	NBEA	Q8NFP9	2946 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	GAK	O14976	1311 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	PHIP	Q8WWQ0	1821 aa		4.16	□□□□□ -1.74
NFKB1-208	ENST00000509165	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.15	□□□□□ -1.74
NFKB1-208	ENST00000509165	SPEG	Q15772	3267 aa		4.15	□□□□□ -1.74
NFKB1-208	ENST00000509165	ASPM	Q8IZT6	3477 aa		4.15	□□□□□ -1.74
NFKB1-208	ENST00000509165	GOLGA6L10	A0A0M3HER8	536 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	DENND3	A2RUS2	1198 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	CPED1	A4D0V7	1026 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	EPOP	A6NHQ4	379 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	TEX22	C9J3V5	150 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	KLRF2	D3W0D1	207 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	WNT9B	O14905	357 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	HMMR	O75330	724 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	IFIT1	P09914	478 aa	Known RBP	4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	ZNF8	P17098	575 aa	Predicted RBP	4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	PTPN2	P17706	415 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	ADORA1	P30542	326 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	GYG1	P46976	350 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	GAS1	P54826	345 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	CLDN2	P57739	230 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	COASY	Q13057	564 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	SOWAHA	Q2M3V2	549 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	ESCO2	Q56NI9	601 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	TYW3	Q6IPR3	259 aa	Known RBP	4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	TMED8	Q6PL24	325 aa	Predicted RBP	4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	FAM160B2	Q86V87	743 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	ERC1	Q8IUD2	1116 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	PLD5	Q8N7P1	536 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	NAV1	Q8NEY1	1877 aa		4.15	□□□□□ -1.75
NFKB1-208	ENST00000509165	LAMA4	Q16363	1823 aa		4.14	□□□□□ -1.75
NFKB1-208	ENST00000509165	ATAD5	Q96QE3	1844 aa		4.14	□□□□□ -1.75
NFKB1-208	ENST00000509165	DSP	P15924	2871 aa	Known RBP	4.14	□□□□□ -1.75
NFKB1-208	ENST00000509165	SMTNL1	A8MU46	457 aa		4.14	□□□□□ -1.75
NFKB1-208	ENST00000509165	KLK8	O60259	260 aa		4.14	□□□□□ -1.75
NFKB1-208	ENST00000509165	SURF6	O75683	361 aa	Known RBP	4.14	□□□□□ -1.75
NFKB1-208	ENST00000509165	RGS11	O94810	467 aa		4.14	□□□□□ -1.75
NFKB1-208	ENST00000509165	CH25H	O95992	272 aa		4.14	□□□□□ -1.75
NFKB1-208	ENST00000509165	UROD	P06132	367 aa		4.14	□□□□□ -1.75
NFKB1-208	ENST00000509165	EDN2	P20800	178 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms