RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PIP4K2AP48426 406 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 LIMK1P53667 647 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 SNU13P55769 128 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM3BP58499 235 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 YWHAZP63104 245 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 ARHGAP8P85298 464 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 IL1RL1Q01638 556 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 BNC1Q01954 994 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 AKAP17AQ02040 695 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 GRSF1Q12849 480 aaKnown RBP eCLIP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 RPA4Q13156 261 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 TDGQ13569 410 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 FRG1Q14331 258 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 LASP1Q14847 261 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 PCLAFQ15004 111 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 INAQ16352 499 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 HIST2H2ACQ16777 129 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 TYSND1Q2T9J0 566 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF284Q2VY69 593 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF805Q5CZA5 627 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 ARL13AQ5H913 290 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 FSCBQ5H9T9 825 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 GKAP1Q5VSY0 366 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 SFMBT2Q5VUG0 894 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 OLFM4Q6UX06 510 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 MIER3Q7Z3K6 550 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 PIWIL3Q7Z3Z3 882 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 TADA2BQ86TJ2 420 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 MON1AQ86VX9 555 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 CAMK1DQ8IU85 385 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 C4orf19Q8IY42 314 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 RNF168Q8IYW5 571 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM185AQ8N0U4 392 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 SIX6OS1Q8N1H7 587 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 MINDY1Q8N5J2 469 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 RFLNBQ8N5W9 214 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 NAT8LQ8N9F0 302 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 DENND6BQ8NEG7 585 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 CADM4Q8NFZ8 388 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 CCDC110Q8TBZ0 833 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 DUSP19Q8WTR2 217 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM216AQ8WUB2 273 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZFAND2BQ8WV99 257 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 RAB40AQ8WXH6 277 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 CTNNBL1Q8WYA6 563 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 MRPS27Q92552 414 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 KRT35Q92764 455 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 PTP4A1Q93096 173 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF622Q969S3 477 aaKnown RBP eCLIP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 SYAP1Q96A49 352 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 ELP4Q96EB1 424 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 VPS39Q96JC1 886 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 C1orf74Q96LT6 269 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 DGAT2Q96PD7 388 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 FIZ1Q96SL8 496 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 NAA11Q9BSU3 229 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 MLPHQ9BV36 600 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 CLPBQ9H078 707 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 ABCG8Q9H221 673 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC32A1Q9H598 525 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 OPA3Q9H6K4 179 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 PIH1D3Q9NQM4 214 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 ENTPD7Q9NQZ7 604 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 PCDHB16Q9NRJ7 776 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 THAP1Q9NVV9 213 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 DCAF16Q9NXF7 216 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 ARHGEF38Q9NXL2 777 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 STK26Q9P289 416 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 IL19Q9UHD0 177 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 IL17BQ9UHF5 180 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 DDX25Q9UHL0 483 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 HAO1Q9UJM8 370 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC25A13Q9UJS0 675 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 TRPC5Q9UL62 973 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 RABL2BQ9UNT1 228 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC12A4Q9UP95 1085 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 RRP15Q9Y3B9 282 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 TRIM17Q9Y577 477 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 PCDHA10Q9Y5I2 948 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 AP1M2Q9Y6Q5 423 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 UTYO14607 1347 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 PLSCR5A0PG75 271 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 HTR3EA5X5Y0 456 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 AGAP5A6NIR3 686 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 FAM90A7PA6NKC0 464 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 FAM90A22PA8MWA6 464 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 FAM90A12PA8MX19 464 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 FAM90A23PA8MXZ1 464 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 USP17L23D6RBM5 183 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 FAM86B1E9PN63 330 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 STMND1H3BQB6 276 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 GRM8O00222 908 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 SLC33A1O00400 549 aaPredicted RBP2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 PER2O15055 1255 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 LIASO43766 372 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 KIF1CO43896 1103 aaKnown RBP2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 HEXIM1O94992 359 aaKnown RBP2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 SIX3O95343 332 aaPredicted RBP2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 FTCDO95954 541 aa2.4□□□□□ -2.03
DEPDC1B-204ENST00000509006 URODP06132 367 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms