RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 RDH14Q9HBH5 336 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 TRNAU1APQ9NX07 287 aaKnown RBP8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 DONSONQ9NYP3 566 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 AKAP7Q9P0M2 348 aaPredicted RBP8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 UBA2Q9UBT2 640 aaPredicted RBP8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 KLHL3Q9UH77 587 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 TUBD1Q9UJT1 453 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 FZD10Q9ULW2 581 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 NOTCH2Q04721 2471 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 ICE1Q9Y2F5 2266 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 PRSS38A1L453 326 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 B4DGG1 531 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 FGF10O15520 208 aaPredicted RBP8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 ZW10O43264 779 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 GFPT2O94808 682 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 HTR3BO95264 441 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 PRKCGP05129 697 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 SERPINA4P29622 427 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 SOX5P35711 763 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 RGRP47804 291 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 ZNF143P52747 638 aaPredicted RBP8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 CFAP58Q5T655 872 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 CDKAL1Q5VV42 579 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 BORAQ6PGQ7 559 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 DPPA4Q7L190 304 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 PHF13Q86YI8 300 aaPredicted RBP8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 LURAP1LQ8IV03 231 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 C3orf20Q8ND61 904 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 ZNF564Q8TBZ8 553 aaPredicted RBP8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 COQ10AQ96MF6 247 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 NSMCE3Q96MG7 304 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 NUDT22Q9BRQ3 303 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 TEX101Q9BY14 249 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 SPRY4Q9C004 299 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 ATP13A3Q9H7F0 1226 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 KCTD5Q9NXV2 234 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 ADAM22Q9P0K1 906 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 PDP2Q9P2J9 529 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 ANKMY1Q9P2S6 941 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 REV1Q9UBZ9 1251 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 ST14Q9Y5Y6 855 aa8.59□□□□□ -1.03
COL4A3BP-206ENST00000508809 RHPN2P1A8MT19 583 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 B4E171 279 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 AGRPO00253 132 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 CCP110O43303 1012 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 HTRA2O43464 458 aaPredicted RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 CREB3O43889 395 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 NTRK1P04629 796 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 CALB1P05937 261 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 ELFN1P0C7U0 828 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 MYCLP1P12525 358 aaPredicted RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 JUNBP17275 347 aaPredicted RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 ALDH4A1P30038 563 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 UGT1A3P35503 534 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 TSPAN7P41732 249 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 NSFP46459 744 aaKnown RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 PAPOLAP51003 745 aaKnown RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 MAZP56270 477 aaKnown RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 UBE2HP62256 183 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 RPL7AP62424 266 aaKnown RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 BCL2L1Q07817 233 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 KCNAB2Q13303 367 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 BECN1Q14457 450 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 RFTN1Q14699 578 aaPredicted RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 CLEC16AQ2KHT3 1053 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 AMZ1Q400G9 498 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 MAP9Q49MG5 647 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 TCP11X2Q5H9J9 407 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 CT47A1Q5JQC4 288 aaPredicted RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 SCYL2Q6P3W7 929 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 THAP5Q7Z6K1 395 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 NAGSQ8N159 534 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 RCBTB1Q8NDN9 531 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 OR4D9Q8NGE8 314 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 PIWIL2Q8TC59 973 aaKnown RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 CATSPER2Q96P56 530 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 DPYSL5Q9BPU6 564 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 CNPY3Q9BT09 278 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 SELENOOQ9BVL4 669 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 DDA1Q9BW61 102 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 GSDMCQ9BYG8 508 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 FRMD8Q9BZ67 464 aaPredicted RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 SLC39A8Q9C0K1 460 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 WDR26Q9H7D7 661 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 SAMSN1Q9NSI8 373 aaKnown RBP8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 TAAR2Q9P1P5 351 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 B3GALT1Q9Y5Z6 326 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 CAPN6Q9Y6Q1 641 aa8.58□□□□□ -1.04
COL4A3BP-206ENST00000508809 UTP20O75691 2785 aaKnown RBP8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 IGHV1OR21-1A0A087WYE8 117 aa8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 ARHGAP42A6NI28 874 aa8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 EIF3CLB5ME19 914 aaKnown RBP8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 PES1O00541 588 aaKnown RBP8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 PPM1DO15297 605 aa8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 TEX33O43247 280 aa8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 PALMO75781 387 aa8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 THRAP10827 490 aa8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 GP1BBP13224 206 aa8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 LIFP15018 202 aa8.57□□□□□ -1.04
COL4A3BP-206ENST00000508809 EEF1GP26641 437 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms