RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MRASO14807 208 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 SLC4A1P02730 911 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 CCR2P41597 374 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 PTPRRQ15256 657 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 C8orf82Q6P1X6 216 aaPredicted RBP10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 GK5Q6ZS86 529 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 RAB44Q7Z6P3 723 aaPredicted RBP10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 DHFR2Q86XF0 187 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 BBS7Q8IWZ6 715 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 GPR65Q8IYL9 337 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 CLYBLQ8N0X4 340 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 GALNT4Q8N4A0 578 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 ANKFN1Q8N957 763 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 HJURPQ8NCD3 748 aaPredicted RBP10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 RMDN1Q96DB5 314 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 TBATAQ96M53 351 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 OLFM1Q99784 485 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 TDRD1Q9BXT4 1180 aaKnown RBP10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 SCUBE2Q9NQ36 999 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 PNPLA3Q9NST1 481 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 TUBA8Q9NY65 449 aaPredicted RBP10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 CFAP97Q9P2B7 532 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 MAFFQ9ULX9 164 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 NDUFAF1Q9Y375 327 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 SPO11Q9Y5K1 396 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 AK5Q9Y6K8 562 aa10.95□□□□□ -0.66
SH3RF1-203ENST00000508685 CCDC160A6NGH7 325 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 AQP12BA6NM10 295 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 VPS4BO75351 444 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 RFPL2O75678 378 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 H6PDO95479 791 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 NDST3O95803 873 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 LATS1O95835 1130 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 MT-CO1P00395 513 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 PRLP01236 227 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 EPOP01588 193 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 FGF4P08620 206 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CCDC166P0CW27 439 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 BMP2P12643 396 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 BMP1P13497 986 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 HNRNPLP14866 589 aaKnown RBP eCLIP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CD1EP15812 388 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 ZNF23P17027 643 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CTNNB1P35222 781 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CSKP41240 450 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 PPIGQ13427 754 aaKnown RBP eCLIP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 COQ5Q5HYK3 327 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 TMEM240Q5SV17 173 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 C6orf52Q5T4I8 152 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 HECTD2Q5U5R9 776 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 IYDQ6PHW0 289 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 TPGS1Q6ZTW0 290 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 LARP4Q71RC2 724 aaKnown RBP eCLIP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 AQP12AQ8IXF9 295 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 TRIML2Q8N7C3 387 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 RNF148Q8N7C7 305 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 DRAXINQ8NBI3 349 aaPredicted RBP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 TSPAN14Q8NG11 270 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 ZFP28Q8NHY6 868 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 BRSK1Q8TDC3 778 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 TSPEARQ8WU66 669 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 LPGAT1Q92604 370 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 ATP6V1E2Q96A05 226 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 MUC13Q9H3R2 512 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 MFSD1Q9H3U5 465 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 POPDC3Q9HBV1 291 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 VPS51Q9UID3 782 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 PTBP2Q9UKA9 531 aaKnown RBP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 APPL1Q9UKG1 709 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CLEC4EQ9ULY5 219 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CCL26Q9Y258 94 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 MYRFQ9Y2G1 1151 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 FCF1Q9Y324 198 aaKnown RBP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 OR51B4Q9Y5P0 310 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 A0A0U1RQS6 177 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 TYW5A2RUC4 315 aaKnown RBP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 TMEM233B4DJY2 109 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 K7ERQ8 282 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 HNRNPRO43390 633 aaKnown RBP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 TLL1O43897 1013 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 OR6B1O95007 311 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 GLUD1P00367 558 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 GOT2P00505 430 aaKnown RBP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 PRSS56P0CW18 603 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 C7P10643 843 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 ETS2P15036 469 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 MSX2P35548 267 aaPredicted RBP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CDKL1Q00532 357 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 BNIP2Q12982 314 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 SEMA3AQ14563 771 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 PPP4R4Q6NUP7 873 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 PAOXQ6QHF9 649 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CCDC149Q6ZUS6 474 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CARM1Q86X55 608 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 APCDD1Q8J025 514 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 PCDH20Q8N6Y1 951 aaKnown RBP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 LPCAT1Q8NF37 534 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 OR2T34Q8NGX1 318 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 OR2T3Q8NH03 318 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms