RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ALDH16A1Q8IZ83 802 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 NEK7Q8TDX7 302 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 IPCEF1Q8WWN9 437 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CIDECQ96AQ7 238 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 BARD1Q99728 777 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ELAC2Q9BQ52 826 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FAM83CQ9BQN1 747 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 DPY30Q9C005 99 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CXorf56Q9H5V9 222 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ACTR8Q9H981 624 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TM7SF3Q9NS93 570 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 MARCH5Q9NX47 278 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 OBP2AQ9NY56 170 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.94□□□□□ -1.945e-6■■■■□ 20.5
NEDD4-208ENST00000508342 GNPTGQ9UJJ9 305 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF180Q9UJW8 692 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 MRTO4Q9UKD2 239 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SNX7Q9UNH6 387 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FAF1Q9UNN5 650 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SATB2Q9UPW6 733 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 A0A1B0GVM2 712 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 A0A1W2PQ27 194 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 A0A1W2PQ64 194 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 A0A1W2PQD8 194 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TCAF2A6NFQ2 919 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 GPR89AB7ZAQ6 455 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 M0R3G1 203 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TLR4O00206 839 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PLK4O00444 970 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TSPAN6O43657 245 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 GPR89BP0CG08 455 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CYP11B1P15538 503 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 VARSP26640 1264 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 S100GP29377 79 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FOLR3P41439 243 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 RANBP1P43487 201 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PMS2P54278 862 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF268Q14587 947 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SF1Q15637 639 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SGCBQ16585 318 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 EARS2Q5JPH6 523 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 BRMS1LQ5PSV4 323 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ATXN7L2Q5T6C5 722 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 MLIPQ5VWP3 458 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 DUS1LQ6P1R4 473 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SHC4Q6S5L8 630 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 LRRC74BQ6ZQY2 392 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FAM92BQ6ZTR7 304 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 C12orf40Q86WS4 652 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 RAB43Q86YS6 212 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CAMK1DQ8IU85 385 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SPEM1Q8N4L4 309 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 C2orf73Q8N5S3 287 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 HMCESQ96FZ2 354 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 EXOC2Q96KP1 924 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 QRFPRQ96P65 431 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ELL3Q9HB65 397 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 KCTD5Q9NXV2 234 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SH3BP4Q9P0V3 963 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM63CQ9P1W3 806 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 WRAP73Q9P2S5 460 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 POU2F3Q9UKI9 436 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PSMD13Q9UNM6 376 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 GMEB1Q9Y692 573 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SDK2Q58EX2 2172 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PIPSLA2A3N6 862 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 RGSL1A5PLK6 1076 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PRR23D1E9PI22 279 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ATMINO43313 823 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SIN3BO75182 1162 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 TRUB2O95900 331 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CATP04040 527 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PRR23D2P0DMB1 279 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 COL6A2P12110 1019 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF7P17097 686 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 VIPR1P32241 457 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ELK3P41970 407 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 MAGEA11P43364 429 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 SRP54P61011 504 aaKnown RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FOXK2Q01167 660 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 DR1Q01658 176 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 NHLH1Q02575 133 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 CAV1Q03135 178 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 STK4Q13043 487 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 MMRN1Q13201 1228 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PRRT3Q5FWE3 981 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PITRM1Q5JRX3 1037 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 RTN4RL1Q86UN2 441 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 NUDCD3Q8IVD9 361 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FAM20CQ8IXL6 584 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 EID3Q8N140 333 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 FBXO15Q8NCQ5 510 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 KCTD13Q8WZ19 329 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 RBM15Q96T37 977 aaKnown RBP eCLIP2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PRRG3Q9BZD7 231 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ABCG8Q9H221 673 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 ELOVL6Q9H5J4 265 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 PARVBQ9HBI1 364 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 IMPAD1Q9NX62 359 aa2.94□□□□□ -1.94
NEDD4-208ENST00000508342 OR12D3Q9UGF7 316 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms